DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1441 and FAR5

DIOPT Version :9

Sequence 1:NP_610535.1 Gene:CG1441 / 36029 FlyBaseID:FBgn0033464 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_190041.2 Gene:FAR5 / 823580 AraportID:AT3G44550 Length:496 Species:Arabidopsis thaliana


Alignment Length:501 Identity:142/501 - (28%)
Similarity:228/501 - (45%) Gaps:96/501 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KGRSLFITGGTGFLGKVLVEKLLRSCGGLKRIYLLIRPKKGKDPQERIK-DIFQNVLFDQVKQMR 96
            :.:::.:||.||||.||.|||:||....:|::|||:|....:...:|:: ::|:..||..::|..
plant    10 RNKTILVTGATGFLAKVFVEKILRVQPNVKKLYLLVRASDNEAATKRLRTEVFEKELFKVLRQNL 74

  Fly    97 GEEH----ILQQVVAIAGDVLSPGLGISEKDL-ETLRQEVSIVYHCAATVRFDEPLRNAVFMNTR 156
            |:|.    :.::||::.||:.:..|||::..| |.:::|:.||.:.|||..|||.....:.:||.
plant    75 GDEKLNTLLYEKVVSVPGDIATDQLGINDSHLRERMQKEIDIVVNVAATTNFDERYDVGLGINTF 139

  Fly   157 GTKYMLELALTLKHLDFFAYCSTAYCHLHVKTLY---EKPYDPPADP------------------ 200
            |         .|..|:|...|......|||.|.|   |||...|..|                  
plant   140 G---------ALNVLNFAKKCVKVQLLLHVSTAYVCGEKPGLIPEKPFIMEEIRNENGLQLDINL 195

  Fly   201 ------HKVMQACEWLTDDEVATIERKVLG-------AIPNTYAYTKSLAEALVVEKFEELPAVI 252
                  .::.:..|....:|..|:..|.||       ..||||.:|||:.|.|:.:..|.||.||
plant   196 ERELMKQRLKELNEQDCSEEDITLSMKELGMERAKLHGWPNTYVFTKSMGEMLLGKHKENLPLVI 260

  Fly   253 LRPSIVIPIWKEPIPGWTDNINGPTGLLIGAGKGVIRTMYCNSSGYGDFLPVDVAVNGILVASWR 317
            :||:::.....||.|||.:.:.....::|..||||::....:.:...|.:|||:..|.::.|:.:
plant   261 IRPTMITSTLSEPFPGWIEGLRTVDSVIIAYGKGVLKCFLVDVNSVCDMIPVDMVANAMITAAAK 325

  Fly   318 NITAGTDKTNRVAHMTSSNDIKVSWAEIIELG-RWVIENKVPLNGVAWYPGGSMKSNYWVHFICM 381
            :  ||....:.|.|:.||:...|::.||.|:. |:..:|  ||..    ..||:.:...|.||  
plant   326 H--AGGSGVHMVYHVGSSHQNPVTFGEIHEIAVRYFTKN--PLRS----RNGSLITVSKVRFI-- 380

  Fly   382 VLFQWMPALFVDALLWILRY--PPVLCRVQNRIY-------------------KGFEVFEYYANN 425
                  |.:.:.:|...|||  |..|.::.:.||                   :..|::|.|...
plant   381 ------PTMALFSLYMTLRYKLPLQLLKLVDIIYPWRNGDKYGDKNRKIELVMRLVELYEPYVLF 439

  Fly   426 VWNFDNSEAVKLRKLMNNKERRTYVIEKIELDLI-------DYFTN 464
            ...||:.....|  ..|.||......||:..|..       ||.||
plant   440 KGIFDDRNTKSL--CANQKEEEIKNTEKLMFDFDPKGINWGDYLTN 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1441NP_610535.1 PLN02996 24..464 CDD:215538 140/499 (28%)
FAR-N_SDR_e 35..348 CDD:187547 107/352 (30%)
Sterile 385..475 CDD:281068 25/108 (23%)
FAR5NP_190041.2 PLN02996 1..495 CDD:215538 142/501 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 159 1.000 Domainoid score I1277
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 182 1.000 Inparanoid score I1437
OMA 1 1.010 - - QHG56516
OrthoDB 1 1.010 - - D815047at2759
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 1 1.000 - - mtm964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X145
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1312.940

Return to query results.
Submit another query.