DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1441 and far1

DIOPT Version :9

Sequence 1:NP_610535.1 Gene:CG1441 / 36029 FlyBaseID:FBgn0033464 Length:517 Species:Drosophila melanogaster
Sequence 2:XP_005174372.1 Gene:far1 / 406829 ZFINID:ZDB-GENE-040426-2908 Length:518 Species:Danio rerio


Alignment Length:515 Identity:177/515 - (34%)
Similarity:283/515 - (54%) Gaps:42/515 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IAECFKGRSLFITGGTGFLGKVLVEKLLRSCGGLKRIYLLIRPKKGKDPQERIKDIFQNVLFDQV 92
            |.|.:.|:::.|||.|||:||||:|||||||.|:|..|:|:|||.|:.|..||.|:....|||::
Zfish     4 IPEYYVGKNVLITGATGFMGKVLLEKLLRSCPGVKAAYVLVRPKAGQAPDARIADMINCKLFDRL 68

  Fly    93 KQMRGEEHILQQVVAIAGDVLSPGLGISEKDLETLRQEVSIVYHCAATVRFDEPLRNAVFMNTRG 157
            ::  .:.....::|||..|:..|.|.:|.:|.|||...:::|:|||||:||:|||::|:.:|...
Zfish    69 RE--DQPDFAGKIVAINSDLTQPNLDLSAEDQETLTGCINVVFHCAATIRFNEPLKDAMQLNVLA 131

  Fly   158 TKYMLELALTLKHLDFFAYCSTAYCHLHVKTLYEKPYDPPADPHKVMQACEWLTDDEVATIERKV 222
            |:.|:.||..:|||:.|.:.||||.:...:.:.|..|.||.|..|::...||:.|..|:.:..::
Zfish   132 TQKMVSLAHRMKHLEVFIHVSTAYANCDRELIEEVVYPPPVDYRKLIDTLEWMDDKLVSLMTPRL 196

  Fly   223 LGAIPNTYAYTKSLAEALVVEKFEELPAVILRPSIVIPIWKEPIPGWTDNINGPTGLLIGAGKGV 287
            ||..||||.|||:|||.||.::...|...|:|||||...||||.|||.||.|||:|:.|.||||:
Zfish   197 LGERPNTYTYTKALAEQLVQQECGNLNIAIIRPSIVGASWKEPFPGWIDNFNGPSGIFIAAGKGI 261

  Fly   288 IRTMYCNSSGYGDFLPVDVAVNGILVASWRNITAGTDKTNR-----VAHMTSSNDIKVSWAEIIE 347
            :|||..:::...|.:||||.:|..|.|:|   .:|:.:..|     |.:.|:.......|.|:  
Zfish   262 LRTMRASNNAVADLVPVDVVINTTLAAAW---YSGSQRHARPRSLLVYNCTTGGINPFHWGEV-- 321

  Fly   348 LGRWVIE--NKVPLNGVAWYPGGSMKSNYWVHFICMVLFQWMPALFVDALLWILRYPPVLCRVQN 410
             ...||.  .:.||......|..::.:|:.::...:.:....||...|..|.:....|.:.:...
Zfish   322 -EYHVISTFKRNPLEQAFRRPNVNLTTNHLINQYWIAVSHKAPAFLYDLFLRMSGREPRMMKTIT 385

  Fly   411 RIYKGFEVFEYYANN--VWNFDNSEAVKLRKLMNNKERRTYVIEKIELDLIDYFTNCVLCARRLI 473
            |::|...|.||:.::  |||.||  ...|...|..::::.:..:..:|...:|..|..:..::.:
Zfish   386 RLHKAMMVLEYFTSHSWVWNTDN--VTMLMNQMGAEDKKVFNFDVRQLHWAEYMENYCMGTKKYV 448

  Fly   474 LKESDESIPAARRHMK---------------VMWVV----DKVYKGIWIFGILYMLYRCF 514
            |.|....:||||:|:.               ::|.:    .::.:.||.|    ::..||
Zfish   449 LNEELSGLPAARKHLNKLRNIRYTFNTVLVVLIWRIFIARSQMARNIWYF----VVSLCF 504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1441NP_610535.1 PLN02996 24..464 CDD:215538 163/444 (37%)
FAR-N_SDR_e 35..348 CDD:187547 135/317 (43%)
Sterile 385..475 CDD:281068 20/91 (22%)
far1XP_005174372.1 FAR-N_SDR_e 11..333 CDD:187547 137/329 (42%)
Sterile 360..450 CDD:308580 20/91 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170593277
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56516
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X145
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
76.960

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