DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1441 and Far1

DIOPT Version :9

Sequence 1:NP_610535.1 Gene:CG1441 / 36029 FlyBaseID:FBgn0033464 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_001011933.1 Gene:Far1 / 293173 RGDID:1306647 Length:515 Species:Rattus norvegicus


Alignment Length:519 Identity:182/519 - (35%)
Similarity:290/519 - (55%) Gaps:54/519 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 IAECFKGRSLFITGGTGFLGKVLVEKLLRSCGGLKRIYLLIRPKKGKDPQERIKDIFQNVLFDQV 92
            |.|.::|:::.:||.||||||||:|||||||..:..:|:|:|.|.|:.||||:::|....|||::
  Rat     4 IPEYYEGKNILLTGATGFLGKVLLEKLLRSCPKVNSVYVLVRQKAGQTPQERVEEILSGKLFDRL 68

  Fly    93 KQMRGEEHILQQVVAIAGDVLSPGLGISEKDLETLRQEVSIVYHCAATVRFDEPLRNAVFMNTRG 157
            :....:  ..|:::||..::..|.|.:||:|.|.:....::::||||||||:|.||:||.:|...
  Rat    69 RDENPD--FRQKIIAINSELTQPKLALSEEDKEIIIDSTNVIFHCAATVRFNENLRDAVQLNVIA 131

  Fly   158 TKYMLELALTLKHLDFFAYCSTAYCHLHVKTLYEKPYDPPADPHKVMQACEWLTDDEVATIERKV 222
            |:.::.||..:|:|:.|.:.||||.:.:.|.:.|..|.||.||.|::.:.||:.|..|..|..|:
  Rat   132 TRQLILLAQQMKNLEVFMHVSTAYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKL 196

  Fly   223 LGAIPNTYAYTKSLAEALVVEKFEELPAVILRPSIVIPIWKEPIPGWTDNINGPTGLLIGAGKGV 287
            :|..||||.|||:|||.:|.::..:|...|:|||||...||||.|||.||.|||:||.|.||||:
  Rat   197 IGDRPNTYIYTKALAEYVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGI 261

  Fly   288 IRTMYCNSSGYGDFLPVDVAVNGILVASW-------RNITAGTDKTNRVAHMTSSNDIKVSWAEI 345
            :|||..:::...|.:||||.||..|.|:|       |||        .|.:.|:.:.....|.|:
  Rat   262 LRTMRASNNALADLVPVDVVVNTSLAAAWYSGVNRPRNI--------MVYNCTTGSTNPFHWGEV 318

  Fly   346 IELGRWVIENKVPLNGVAWYPGGSMKSNYWVHFICMVLFQW------MPALFVDALLWILRYPPV 404
            .:......:.. |||.|..:|.....||.      ::|..|      :|||.:|..|.:....|.
  Rat   319 GDYLNHSFKTN-PLNQVFRHPYVKFYSNN------LMLHYWKGVKHTVPALLLDLALRLTGQKPW 376

  Fly   405 LCRVQNRIYKGFEVFEYYANN--VWNFDNSEAVKLRKLMNNKERRTYVIEKIELDLIDYFTNCVL 467
            :.:...|::|.....||:.:|  |||.||..  .|...:|.::::|:.|:..:|...:|..|..:
  Rat   377 MMKTITRLHKAMVFLEYFTSNSWVWNTDNVN--MLMNQLNPEDKKTFNIDVRQLHWAEYIENYCM 439

  Fly   468 CARRLILKESDESIPAARRHMK---------------VMWVV----DKVYKGIWIFGILYMLYR 512
            ..::.:|.|....:||||:|:.               ::|.:    .::.:.||.| ::.:.|:
  Rat   440 GTKKYVLNEEMSGLPAARKHLNKLRNIRYGFNTILVILIWRIFIARSQMARNIWYF-VVSLCYK 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1441NP_610535.1 PLN02996 24..464 CDD:215538 169/450 (38%)
FAR-N_SDR_e 35..348 CDD:187547 135/319 (42%)
Sterile 385..475 CDD:281068 24/97 (25%)
Far1NP_001011933.1 PLN02996 2..446 CDD:215538 170/460 (37%)
FAR-N_SDR_e 11..330 CDD:187547 135/329 (41%)
Sterile 371..447 CDD:281068 18/77 (23%)
Necessary and sufficient for PEX19-mediated localization into peroxisome membrane. /evidence=ECO:0000250|UniProtKB:Q8WVX9 451..507 10/53 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166351491
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3320
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56516
OrthoDB 1 1.010 - - D221518at33208
OrthoFinder 1 1.000 - - FOG0000172
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11011
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X145
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
98.860

Return to query results.
Submit another query.