DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1513 and Plekha8

DIOPT Version :9

Sequence 1:NP_610534.3 Gene:CG1513 / 36028 FlyBaseID:FBgn0033463 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_001157833.1 Gene:Plekha8 / 231999 MGIID:2681164 Length:519 Species:Mus musculus


Alignment Length:409 Identity:103/409 - (25%)
Similarity:167/409 - (40%) Gaps:107/409 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LEGTLSKWTNVMKGWQYRFFVLDENAGLLSYYTSKDKMIKGVRRGCVRLKDALIGIDDQEDNTFT 88
            :||.|.||||.:.|||.|:|:|  ..|:||||.|.:...||. :|.:::....|.:...::....
Mouse     1 MEGVLYKWTNYLSGWQPRWFLL--CGGILSYYDSPEDAWKGC-KGSIQMAVCEIQVHSVDNTRMD 62

  Fly    89 ITV-DHKTFHFQARHNEEREQWVRRLEDTIRRHANRSRLWDSQSAFYIAGGYTKEGGGSGTGGRR 152
            :.: ..:.|:.:||...||::|:..|...      ::.|.||::        .||       ...
Mouse    63 LIIPGEQYFYLKARSVAERQRWLVALGSA------KACLTDSRT--------QKE-------KEF 106

  Fly   153 PNHLELVARRVSEADAYLQLMIEQTNLLDK----RIAELTDPAE--------QSKC----KALQD 201
            ..:.|.:..::||...|..|:::|   :||    ..|.:||..|        :|.|    |.|::
Mouse   107 AENTENLKTKMSELRLYCDLLVQQ---VDKTKEVATAGVTDSEEGIDVGTLLKSTCNTFLKTLEE 168

  Fly   202 ---NANA-----MLDHIKHSIVSLQIAKN--MAHPINGIYNGPPATASTSSSTSGVAMGSCNNVQ 256
               .|||     :|.|.......|.:.|:  |.|||..|:|         |....:.:.||.|  
Mouse   169 CMQIANAAFTSELLYHTPPGSPQLAVLKSSKMKHPIIPIHN---------SLERSMELNSCEN-- 222

  Fly   257 AGGLKVPLEGQVIGKGELVDDEEDSATENATTAPLGLIVPAT----SYSSSEGEEDFYDAYDDPF 317
             |.|.:.:.|         |:|....|:::      |.:.:|    |.||.|..:|......:..
Mouse   223 -GSLSIEVNG---------DEEILMKTKSS------LYLKSTEVDCSISSEENTDDNVTVQGEIM 271

  Fly   318 TSIGSSPIGCATRGFAETTSPTHEKAPDGFANAEPVAVGDSV-APQTLPEIDESVADADTSIKTA 381
            ...|            |....:|:|.|     |:|.:  ||| :|::..|.:|.|  ..|...|.
Mouse   272 KEDG------------EENLESHDKDP-----AQPGS--DSVCSPESPWEDNEEV--IPTFFSTM 315

  Fly   382 RTAVSSRSASYDNGIDYDA 400
            .|:.|......|:||..:|
Mouse   316 NTSFSDIELLEDSGIPTEA 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1513NP_610534.3 PH_ORP9 24..125 CDD:241444 30/101 (30%)
PH 25..118 CDD:278594 30/93 (32%)
Oxysterol_BP 421..767 CDD:279564
Plekha8NP_001157833.1 PH_FAPP1_FAPP2 1..100 CDD:269951 33/107 (31%)
PH 1..93 CDD:278594 30/100 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 275..302 11/45 (24%)
Glycolipid transfer protein homology domain 330..473 2/5 (40%)
GLTP 333..470 CDD:285880 1/2 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.