DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec24AB and AT4G32640

DIOPT Version :10

Sequence 1:NP_610531.1 Gene:Sec24AB / 36025 FlyBaseID:FBgn0033460 Length:1184 Species:Drosophila melanogaster
Sequence 2:NP_194990.5 Gene:AT4G32640 / 829399 AraportID:AT4G32640 Length:1080 Species:Arabidopsis thaliana


Alignment Length:1247 Identity:375/1247 - (30%)
Similarity:540/1247 - (43%) Gaps:246/1247 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VPPAHAPMPLNGNNFVNGVQGSVQQQPGPP---PGQQ-----YIPQKQPQQFQQPPPAAAFPGAG 65
            |||. ||.|            :.||..|||   ||.|     .....|.....:|||  ..||:|
plant     5 VPPG-APRP------------NSQQNSGPPNFYPGSQGNSNALADNMQNLSLNRPPP--MMPGSG 54

  Fly    66 APGNVPPPQQFNSGITNQFLPPTSGAATPLQQLPPSTLPPHLRPPAAN--GPPLTNGSNGASSAN 128
                 |.|.           ||...:..|..|..||...|...|...:  |||          |.
plant    55 -----PRPP-----------PPFGQSPQPFPQQSPSYGAPQRGPSPMSRPGPP----------AG 93

  Fly   129 SSRTASPRPVGAAPQYAQGPIAAALNNPPLASGLRPSPQPTHQSLANLTSNLENLNLNTTRANGG 193
            .:|...|.|| :.|...|..:  .||.|   :| .||.||:..|..::.              ||
plant    94 MARPGGPPPV-SQPAGFQSNV--PLNRP---TG-PPSRQPSFGSRPSMP--------------GG 137

  Fly   194 TSILPQPQTQQQYAPTVTQKDGRGVASAQTGPPQFNDANSLLAASGVAAALVPNAMATPFSGQKP 258
            .  :.||                  |::.:|.|.|..:.|      |||...|.:....| |..|
plant   138 P--VAQP------------------AASSSGFPAFGPSGS------VAAGPPPGSRPMAF-GSPP 175

  Fly   259 P---NLAPNPAKMFGSASMAGRPTPAGQRIPYGVPPPTNPEQQSQQNNNLQNAPPPPRVGAVWPP 320
            |   .::..|:.|.|.....|.........|.|...|             ..|...|:...|.||
plant   176 PVGSGMSMPPSGMIGGPVSNGHQMVGSGGFPRGTQFP-------------GAAVTTPQAPYVRPP 227

  Fly   321 SLPNVAAP----------GAQPMMP---PAQQTPQTYPYSQVYQPGPQQQPPPPQSAVQPPPPGM 372
            |.|....|          |..|:.|   |:...|.|:|.:...:|.....|..|.||...||.|.
plant   228 SAPYARTPPQPLGSHSLSGNPPLTPFTAPSMPPPATFPGAPHGRPAVSGLPYGPPSAQVAPPLGF 292

  Fly   373 FGTQPTGAPLQYQAQAPPQAYGQHPQQAP---QTAPGGPYGTTAPLNVAQQGFSRLWGQDTIDLM 434
            .|          |.|.|....|..|.|:.   .||.|.| |.|.|      |.||:   |...:.
plant   293 PG----------QMQPPRYGMGPLPNQSMTNIPTAMGQP-GATVP------GPSRI---DPNQIP 337

  Fly   435 QNRHILTPATL---------PPPKVVLHNQFHESINCSPSIMRCTLTKIPESNSLLQKSRLPLGI 490
            :.....:|...         |||.........::.||||..||||:.:||.:..||..|.:.|.:
plant   338 RPGSSSSPTVFETRQSNQANPPPPATSDYVVRDTGNCSPRYMRCTINQIPCTVDLLSTSGMQLAL 402

  Fly   491 VIHPFR-DVNSLPVIQCINI-----VRCRLCRTYINPFVYFVD-SKMWKCNLCYRVNELPDDF-- 546
            ::.|.. ...|...||.::.     |||..|:.|||||:.|:| .:.:.||.|...:|.|.|:  
plant   403 MVQPLALSHPSEEPIQVVDFGEGGPVRCSRCKGYINPFMKFIDQGRKFICNFCGYTDETPRDYHC 467

  Fly   547 QFDPATKTYGDVTRRPEVRSSTIEFIAPSEYMLRPPQPAMYLFLFDVSIIAQQSGYLEAACAVLN 611
            ...|..:. .||..|||:...|:||:|..|||:|.|.||:|.||.|||:.|.|:|...|||..:.
plant   468 NLGPDGRR-RDVDERPELCRGTVEFVATKEYMVRDPMPAVYFFLIDVSMNAIQTGATAAACNAIQ 531

  Fly   612 RHLDEMPGDARTQVGFICFDSFVHFYSMAEGLNQPHEMTLLDIEDPFLPRPDSLLVNLKECKELV 676
            :.|.::|...||.||...|||.:|||::...|.||..:.:.|::|.:.|....::|.|.||::.:
plant   532 QVLSDLPEGPRTFVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLETDVVVQLSECRQHL 596

  Fly   677 RDLLKQLPKRFAHTHDPGSALGAALQVAFKLMQASGGRITVFQSCLPNKGPGALEPRE---DPNN 738
            ..||..:|..|..:..|.||.|||::.||..|::.||::.||||.|.:.|.|||..||   ..|.
plant   597 ELLLDSIPTMFQESKIPESAFGAAVKAAFLAMKSKGGKLMVFQSILCSVGVGALSSREAEGRANM 661

  Fly   739 RSAKDVAH--LNPATDFYKRFALECSGYQIACDLFLMNQQYSDMATISGISKHSGGCVH-HFPLY 800
            .:.:..||  |.||....|..|:|.:.||:..|:|:..|.|.|||:||.|.:.:||.|: ::|..
plant   662 SAGEKEAHKLLQPADKTLKTMAIEFAEYQVCVDIFITTQAYVDMASISVIPRTTGGQVYCYYPFS 726

  Fly   801 QKTKPHMVESFRSCFKRYLTRKIGFEAVMRIRCTRGLQVHTFHGNFFVRSTDLLSLPNVNPDAGY 865
            ..:.|   ....:..|..:||..|||||||:||::|:||..:.|||..|....:.||        
plant   727 ALSDP---PKLYNDLKWNITRPQGFEAVMRVRCSQGIQVQEYSGNFCKRIPTDIDLP-------- 780

  Fly   866 GMQISYEESLTDAKTICFQAALLYTNSEGERRIRVHTVCLPVTASLPEVMHSADTEAIIGLLSKM 930
                ::::.|.|.....||.|||||...|||||||.|:.|..|..|..:..:||.::....:.|.
plant   781 ----AHDDKLQDGAECAFQCALLYTTIYGERRIRVTTLSLSCTNMLSNLFRAADLDSQFACMLKQ 841

  Fly   931 AVDRSVASNLSDARDAFINATIDVYNAF-KIAQNLPSGQSGQLIAPRSLALLPLYILALLKHPAF 994
            |.:...:..|...::...|:.|:...|: |....:.|  |||||.|.:|.|.|||.|||.|....
plant   842 AANEIPSKALPLVKEQATNSCINALYAYRKFCATVTS--SGQLILPEALKLFPLYTLALTKSVGL 904

  Fly   995 RVGTSTRLDDRVYAMDCMKTLPLDQLMKYVYPELYKIDALIYHARNSNISSNQDDDEDEDEPLPE 1059
            |  |..|:|||.:.::.:.:|.....:..|||.:..:..|             |..:.|...|| 
plant   905 R--TDGRIDDRSFWINYVSSLSTPLAIPLVYPRMISVHDL-------------DVKDTEGSVLP- 953

  Fly  1060 LPRLQLSAEHLDSRSIFLMDCGTLIMIYVGLNVPPDVLEAVLGISSTAELGDYVYGLPNVVSNEN 1124
             |.:.||:||:.:..::.::.|...:::||.:|..|:|:.:..:||.||       :||      
plant   954 -PPIPLSSEHISNEGVYFLENGEDGLLFVGESVDSDILQKLFAVSSAAE-------IPN------ 1004

  Fly  1125 DVLKRFILRLNYD----KPYSALVQIIRDTSTA--------KGQ-----FTERLTDDRSESSLSY 1172
                :|:|: .||    |.::..|..||....:        ||:     |...:.:||:.|..||
plant  1005 ----QFVLQ-QYDNQLSKKFNDAVNEIRRQRCSYLRIKLCKKGEPSGMLFLSYMVEDRTASGPSY 1064

  Fly  1173 YEFLQHIRAQVK 1184
            .|||..:..|::
plant  1065 VEFLVQVHRQIQ 1076

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec24ABNP_610531.1 PHA03247 <72..426 CDD:223021 92/374 (25%)
COG5028 383..1184 CDD:227361 277/845 (33%)
AT4G32640NP_194990.5 PHA03247 <65..345 CDD:223021 90/370 (24%)
COG5028 273..1076 CDD:227361 285/875 (33%)

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