DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec24AB and AT2G27460

DIOPT Version :10

Sequence 1:NP_610531.1 Gene:Sec24AB / 36025 FlyBaseID:FBgn0033460 Length:1184 Species:Drosophila melanogaster
Sequence 2:NP_565651.1 Gene:AT2G27460 / 817291 AraportID:AT2G27460 Length:745 Species:Arabidopsis thaliana


Alignment Length:836 Identity:188/836 - (22%)
Similarity:307/836 - (36%) Gaps:217/836 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   467 MRCTLTKIPESNSLLQKSRLPLGIVIHPF--RDVNSLPVIQCIN---IVRCRLCRTYINPFVYFV 526
            :|.|:::.|..:...:.|.||.|:.:.||  :|.|.:......|   :.||..|..|.|.:.. :
plant     3 VRATVSRFPIDSDAQEASGLPWGLTVTPFAAKDENGIGPACGSNGHLLPRCENCYAYFNTYCE-L 66

  Fly   527 DSKMWKCNLCYRVNELPDDFQFDPATKTYGDVTRRPEVRSSTIEFIAP---SEYMLRPPQPAMYL 588
            |...|.|:||..:|.||.|     |...|.:....||:.||.|:...|   ||..:...:| :|:
plant    67 DQWAWNCSLCGTLNGLPSD-----AIARYSNPHSIPEMTSSFIDLEMPLDGSEEEMTQARP-VYV 125

  Fly   589 FLFDVSIIAQQSGYLEAACAVLNRHLDEM-PGDARTQVGFICFDSFVHFYSMAEGLNQPHEMTLL 652
            ...|:|   ....:||...:.|...|:.: ||   ...|.:.|.               |::.|.
plant   126 AAIDIS---SSEEFLELTKSALLAALEALSPG---ALFGLVTFS---------------HKIGLY 169

  Fly   653 DIEDP-------FLPRPD---SLLVNLKE-------------CKELVRDLLKQLPKRFAHTHDPG 694
            |::.|       |:| ||   ||.:.|::             ||:.:...|:.|....:.....|
plant   170 DVQGPIPVVKNVFIP-PDGESSLSLELEDVMPLLQFLAPVETCKDRIAAALETLRPITSWERSAG 233

  Fly   695 S------------ALGAALQVAFKLMQASGG------RITVFQSCLPNKGPGALEP----REDPN 737
            :            ..|.|::..|..:.:..|      |:..|.|..|:.|.|.|:.    .:..:
plant   234 AGQGMDSVLMGGRGFGTAMEALFNYLGSEFGNTFALARVFAFLSGPPDYGRGQLDTSRYGEQYAS 298

  Fly   738 NRSAKDVAHLNPATDFYKRFALECSGYQIACDLFLMNQQYSDMATISGISKHSGGCVHHFPLYQK 802
            .|...|.|.|...|.|||..|.......:..|||.:..:|:|:|::..:|..|||.:.   ||..
plant   299 KRVDADRALLPEQTPFYKDLATIAVQSGVCVDLFAVTNEYTDLASLKFLSIESGGSLF---LYSS 360

  Fly   803 TKPHMVESFRSCFKRYLTRKIGFEAVMRIRCTRGLQVHTFHGNFFVRSTDLLSLPNVNPDAGY-G 866
            |....:.  :..| |.|.|...|..|:|:|.:...:.....|:||             ||..| .
plant   361 TDDSTLP--QDMF-RMLNRPYAFNCVLRLRTSTEFKPGNSFGHFF-------------PDPQYEN 409

  Fly   867 MQ----------ISYEESLTD--------AKTICFQAALLYT---------NSEG---------- 894
            :|          .:|:....|        .:....|.|..||         |||.          
plant   410 LQHIICCDSYATYAYDFEFADNTGFSRHSGEQPVVQIAFQYTVVVPPEGLSNSEMSSSSRGKHTL 474

  Fly   895 ERRIRVHTVCLPVTASLPEVMHSADTEAIIGLLSKMAVDRSVASNLSDAR----DAFINATIDVY 955
            :||:|:.|:......::.|:..|.|.|.::.||....:..|:...:.:.|    |..:..|....
plant   475 QRRLRIRTMQFGTAHNINEIYDSVDHEVVLSLLVHKVILASLEDGVREGRALLHDWLVILTAQYN 539

  Fly   956 NAFKIAQ--NLPSGQSGQLIAPRS----LALLPLYILALLKHPAFRV-GTSTRLDDRVYAMDCMK 1013
            :||.:.|  |.....|.|:....|    |..||..:.|||::|..|. ......|.|:|......
plant   540 DAFNLVQYKNGNKSMSSQIDITFSQCPQLEPLPRLVFALLRNPLLRFHEEGVHPDYRIYLQCLFS 604

  Fly  1014 TLPLDQLMKYVYPELYKI---DALIYHARNSNISSNQDDDEDEDEPLPELPRLQLSAEHL--DSR 1073
            .|....|...:||.|...   |.|.|                        ||..||...|  ...
plant   605 VLDPSSLHCGIYPALMSYSTPDTLAY------------------------PRHSLSRAALITSGS 645

  Fly  1074 SIFLMDCGTLIMIYVGLNVPPDVLEAVLGISSTAELGDYVYGLPNV--VSNENDVLKRFILRLNY 1136
            .||.:|..|.::::               .||||:        |::  ...::.:|::.|.::..
plant   646 PIFFLDAYTTLIVF---------------YSSTAD--------PSIPFPPPQDCLLRQTINKVKQ 687

  Fly  1137 DK---PYSALVQIIRDTSTAKGQFTERLTDDRS------ESSLSYYEFLQHIRAQV 1183
            ::   |....::..||.:|.   |...|.:::.      .|::.:..||..|..:|
plant   688 ERSITPKLVFIRGGRDDATV---FENYLIEEQDVDGNGFASAMGFVSFLDDISQRV 740

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec24ABNP_610531.1 PHA03247 <72..426 CDD:223021
COG5028 383..1184 CDD:227361 188/836 (22%)
AT2G27460NP_565651.1 COG5028 3..723 CDD:227361 183/817 (22%)
vWFA 119..372 CDD:469594 62/281 (22%)
Blue background indicates that the domain is not in the aligned region.

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