DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec24AB and Sec24a

DIOPT Version :10

Sequence 1:NP_610531.1 Gene:Sec24AB / 36025 FlyBaseID:FBgn0033460 Length:1184 Species:Drosophila melanogaster
Sequence 2:NP_780464.2 Gene:Sec24a / 77371 MGIID:1924621 Length:1090 Species:Mus musculus


Alignment Length:1177 Identity:492/1177 - (41%)
Similarity:663/1177 - (56%) Gaps:194/1177 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   108 RPPAANGPPLT-NGSNGASSANSSRTASPRPVGAAPQYAQGPIAAALNNPPLAS---------GL 162
            |.|||.|...: ...|||:||:.|            .|..||:...|.:|.::|         |.
Mouse     5 RIPAARGAAASLQAQNGAASASGS------------PYTNGPVHNTLMSPQVSSSQGYDSQPPGS 57

  Fly   163 RPSPQPTHQSLANLTSNLENLNLNTTRANGGTSILPQPQTQQQYAPTVTQKDGRGVASAQTGPPQ 227
            .|.|.|.           :.||..:.::|.|.|   |...|...:|.||  .|..:.|..:||  
Mouse    58 YPRPMPA-----------KTLNPFSAQSNYGGS---QGSGQTLNSPLVT--SGPVLPSLHSGP-- 104

  Fly   228 FNDANSLLAASGVAAALVPNAMATPFSGQKPPNLAPNPAKMFGSASMAGRPTPAGQRIPYGVPPP 292
                             ||. |..|.|        .||         |..|.|:|..:|...|||
Mouse   105 -----------------VPR-MPLPTS--------QNP---------AATPMPSGSFLPGANPPP 134

  Fly   293 T-----NPEQQSQQNNNLQNAPPP--------------------------PRVGAVWP---PSLP 323
            .     |......|.|:..:..||                          .:.|:..|   |.||
Mouse   135 PLNWQYNYPSTGPQTNHFPHVAPPTLPGNPNLTADHQYVSSGDPALQTSFKKPGSALPLQNPPLP 199

  Fly   324 NVAAPGAQPMMPPAQQTPQTYPYSQVYQPGPQQQPPPPQSAVQPPP------------------- 369
            ....|||.|..|||...|.:        .||..|..||::|  |||                   
Mouse   200 PTFQPGAPPGPPPAGGPPPS--------RGPAPQKTPPRAA--PPPSFNSAVNQEGITSNANNGS 254

  Fly   370 ------------------PGMFGTQP----------TGAPLQYQAQAPPQA--------YGQHPQ 398
                              |.:....|          ...|..||..|||.|        |...||
Mouse   255 TAAHNTYDEIEGGGFLATPQLVNQNPKTSRSVGSAYPSLPPGYQNSAPPVAGMPPPSLSYPSGPQ 319

  Fly   399 QAPQTAPGGPYGTTAPLNVAQQGFS-RLWGQDTIDLMQNRHILTPATLPPPKVVLHNQFHESINC 462
            ...||..|..:     |..:..|.| ...|...::|:|.|::|....|.||...|.... :.:||
Mouse   320 AFTQTPLGANH-----LTASMSGLSLHPEGLRVVNLLQERNMLPSTPLQPPVPNLLEDI-QKLNC 378

  Fly   463 SPSIMRCTLTKIPESNSLLQKSRLPLGIVIHPFRDVNSLPVIQCINIVRCRLCRTYINPFVYFVD 527
            :|.:.|||||.:|::.:||.|::||||:::|||:|:..|||:....|||||.|||||||||.|:|
Mouse   379 NPELFRCTLTSVPQTQALLNKAKLPLGLLLHPFKDLVQLPVVTSSTIVRCRSCRTYINPFVNFLD 443

  Fly   528 SKMWKCNLCYRVNELPDDFQFDPATKTYGDVTRRPEVRSSTIEFIAPSEYMLRPPQPAMYLFLFD 592
            .:.||||||||||::|::|.::|.|:.||:..:||||:::||||:||||||||||||.:|||:||
Mouse   444 QRRWKCNLCYRVNDVPEEFMYNPLTRVYGEPHKRPEVQNATIEFMAPSEYMLRPPQPPVYLFVFD 508

  Fly   593 VSIIAQQSGYLEAACAVLNRHLDEMPGDARTQVGFICFDSFVHFYSMAEGLNQPHEMTLLDIEDP 657
            ||..|.::|||.:.|..|..:||.:||:.||::|||.|||.:||||:.|||:||..:.:.||:|.
Mouse   509 VSHNAIETGYLNSVCQSLLDNLDLLPGNTRTKIGFITFDSTIHFYSLQEGLSQPQMLIVSDIDDV 573

  Fly   658 FLPRPDSLLVNLKECKELVRDLLKQLPKRFAHTHDPGSALGAALQVAFKLMQASGGRITVFQSCL 722
            |:|.|::|||||.|.||||:||||.||:.|..|.:..||||.|||.||||:..:|||::|||:.|
Mouse   574 FIPMPENLLVNLNESKELVQDLLKTLPQMFTKTLETQSALGPALQAAFKLISPTGGRMSVFQTQL 638

  Fly   723 PNKGPGALEPREDPNNRSAKDVAHLNPATDFYKRFALECSGYQIACDLFLMNQQYSDMATISGIS 787
            |..|.|||:|||:||.||:....||.|:|||||:.||:|||.|.|.||||::.||||:|::..||
Mouse   639 PTLGVGALKPREEPNQRSSAKEIHLTPSTDFYKKLALDCSGQQAAVDLFLLSGQYSDLASLGCIS 703

  Fly   788 KHSGGCVHHFPLY-QKTKPHMVESFRSCFKRYLTRKIGFEAVMRIRCTRGLQVHTFHGNFFVRST 851
            ::|.|.|:::|.| .:..|..|:..:....||||||||||||||||||:||.:||||||||||||
Mouse   704 RYSAGSVYYYPSYHHQHNPVQVQKLQKELHRYLTRKIGFEAVMRIRCTKGLSIHTFHGNFFVRST 768

  Fly   852 DLLSLPNVNPDAGYGMQISYEESLTDAKTICFQAALLYTNSEGERRIRVHTVCLPVTASLPEVMH 916
            ||||||||||||||.:|:|.||||||.:.:.||:|||||:|:|||||||||:||||.::|.||..
Mouse   769 DLLSLPNVNPDAGYAVQMSVEESLTDTQLVSFQSALLYTSSKGERRIRVHTLCLPVVSTLNEVFL 833

  Fly   917 SADTEAIIGLLSKMAVDRSVASNLSDARDAFINATIDVYNAFKIAQNLPSGQSGQLIAPRSLALL 981
            .||.:||.|||:.|||||||.::|||||||.:||.||..:|::  .::.|||...|:.|.||.|.
Mouse   834 GADVQAISGLLANMAVDRSVTASLSDARDALVNAVIDSLSAYR--SSVLSGQQPGLMVPFSLRLF 896

  Fly   982 PLYILALLKHPAFRVGTSTRLDDRVYAMDCMKTLPLDQLMKYVYPELYKIDALIYHARNSNISSN 1046
            ||::|||||..:|:.|||.|||:|::||..:|:.||..||...:|.||::|.|          |:
Mouse   897 PLFVLALLKQKSFQTGTSIRLDERIFAMCQVKSQPLVHLMLTTHPSLYRVDNL----------SD 951

  Fly  1047 QDDDEDEDEPLPELPRLQLSAEHLDSRSIFLMDCGTLIMIYVGLNVPPDVLEAVLGISSTAELGD 1111
            :......|..:|:.|.||||.|.|.....||||.|:|:|::||.|...:.|..|||:.:.|.:..
Mouse   952 EGALNINDRTIPQPPILQLSVEKLSRDGAFLMDAGSLLMLWVGRNCSQNFLSQVLGVQNYASIPQ 1016

  Fly  1112 YVYGLPNVVSNENDVLKRFILRLNYDKPYSALVQIIRDTSTAKGQFTERLTDDRSESSLSYYEFL 1176
            .:..||.:.:.|:..:..||..|...:|:..::.:||:.|..|..|.:.|.:||:||:|||||||
Mouse  1017 TMTDLPELDTPESARIAAFISWLREQRPFFPVLYVIREESLMKAAFLQSLVEDRTESALSYYEFL 1081

  Fly  1177 QHIRAQV 1183
            .||:.||
Mouse  1082 LHIQQQV 1088

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec24ABNP_610531.1 PHA03247 <72..426 CDD:223021 95/417 (23%)
COG5028 383..1184 CDD:227361 412/811 (51%)
Sec24aNP_780464.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..260 77/329 (23%)
PHA03247 <5..367 CDD:223021 103/441 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 272..325 13/52 (25%)
COG5028 295..1090 CDD:227361 412/812 (51%)
Zinc finger-like 428..452 17/23 (74%)
Gelsolin-like. /evidence=ECO:0000255 963..1036 26/72 (36%)

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