DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec24AB and SEC24A

DIOPT Version :10

Sequence 1:NP_610531.1 Gene:Sec24AB / 36025 FlyBaseID:FBgn0033460 Length:1184 Species:Drosophila melanogaster
Sequence 2:NP_068817.1 Gene:SEC24A / 10802 HGNCID:10703 Length:1093 Species:Homo sapiens


Alignment Length:1200 Identity:502/1200 - (41%)
Similarity:680/1200 - (56%) Gaps:190/1200 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 PGAGAPGNVPPPQQFNSGIT-NQFLPPTSGAATPLQ----------------QLPPSTLPPHLRP 109
            ||..|.|..|...|..:|.. ....|.|:|   |:|                |||.|.  ||  |
Human     4 PGIPASGGAPASLQAQNGAALASGSPYTNG---PVQNALLSSQESVSQGYNFQLPGSY--PH--P 61

  Fly   110 -PAANGPPLTNGSNGASSANSSRTASPRPVGAAPQYAQGPIAAALNNPPLASGLRP-SPQPTHQS 172
             ||....|::..||...|..|.:|.:..||      |..|:     .|.|.||..| .|.|..|:
Human    62 IPAKTLNPVSGQSNYGGSQGSGQTLNRPPV------ASNPV-----TPSLHSGPAPRMPLPASQN 115

  Fly   173 LANL----TSNLENLNLNTTRANGGTSILPQP-QTQQQYAPTVTQKDGRGVASAQTGPPQFNDAN 232
            .|..    :|.|...|            ||.| ..|..|..|.:|.:....||:|          
Human   116 PATTPMPSSSFLPEAN------------LPPPLNWQYNYPSTASQTNHCPRASSQ---------- 158

  Fly   233 SLLAASGVAAALVPNAMATPFSGQKPPNLAPNPAKMFGSASMAGRPTPAGQRIPYGVPPPTNPEQ 297
                                      |.::       |:.|:    |...|.:..|.|       
Human   159 --------------------------PTVS-------GNTSL----TTNHQYVSSGYP------- 179

  Fly   298 QSQQNNNLQNAPP-PPRVGAVWPPSLPNVAAPGAQPMMPPA-------QQTPQTYPYSQVYQP-- 352
             |.||:.:::.|. ||.|.    |.||....|||....|||       ..||.|..|..|.||  
Human   180 -SLQNSFIKSGPSVPPLVN----PPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSSYRDVPQPLF 239

  Fly   353 ----------------------------------GPQ---QQPPPPQS---AVQPPPPGMFGTQP 377
                                              .||   :.|...:|   :....|||...|.|
Human   240 NSAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVGYSYPSLPPGYQNTTP 304

  Fly   378 TGAPLQYQAQAPPQA--YGQHPQQAPQTAPGGPYGTTAPLNVAQQGFSRLWGQDTIDLMQNRHIL 440
            .||     ...||.:  |...||...||..|..:.||:...::.|.    .|...::|:|.|::|
Human   305 PGA-----TGVPPSSLNYPSGPQAFTQTPLGANHLTTSMSGLSLQP----EGLRVVNLLQERNML 360

  Fly   441 TPATLPPPKVVLHNQFHESINCSPSIMRCTLTKIPESNSLLQKSRLPLGIVIHPFRDVNSLPVIQ 505
            ....|.||...||... :.:||:|.:.|||||.||::.:||.|::||||:::|||:|:..|||:.
Human   361 PSTPLKPPVPNLHEDI-QKLNCNPELFRCTLTSIPQTQALLNKAKLPLGLLLHPFKDLVQLPVVT 424

  Fly   506 CINIVRCRLCRTYINPFVYFVDSKMWKCNLCYRVNELPDDFQFDPATKTYGDVTRRPEVRSSTIE 570
            ...|||||.|||||||||.|:|.:.||||||||||::|::|.::|.|:.||:..|||||:::|||
Human   425 SSTIVRCRSCRTYINPFVSFLDQRRWKCNLCYRVNDVPEEFLYNPLTRVYGEPHRRPEVQNATIE 489

  Fly   571 FIAPSEYMLRPPQPAMYLFLFDVSIIAQQSGYLEAACAVLNRHLDEMPGDARTQVGFICFDSFVH 635
            |:||||||||||||.:|||:||||..|.::|||.:.|..|..:||.:||:.||::|||.|||.:|
Human   490 FMAPSEYMLRPPQPPVYLFVFDVSHNAVETGYLNSVCQSLLDNLDLLPGNTRTKIGFITFDSTIH 554

  Fly   636 FYSMAEGLNQPHEMTLLDIEDPFLPRPDSLLVNLKECKELVRDLLKQLPKRFAHTHDPGSALGAA 700
            ||.:.|.|:||..:.:.||||.|:|.|::|||||.|.||||:||||.||:.|..|.:..||||.|
Human   555 FYGLQESLSQPQMLIVSDIEDVFIPMPENLLVNLNESKELVQDLLKTLPQMFTKTLETQSALGPA 619

  Fly   701 LQVAFKLMQASGGRITVFQSCLPNKGPGALEPREDPNNR-SAKDVAHLNPATDFYKRFALECSGY 764
            ||.|||||..:|||::|||:.||..|.|||:|||:||:| ||||: |:.|:|||||:.||:|||.
Human   620 LQAAFKLMSPTGGRMSVFQTQLPTLGVGALKPREEPNHRSSAKDI-HMTPSTDFYKKLALDCSGQ 683

  Fly   765 QIACDLFLMNQQYSDMATISGISKHSGGCVHHFPLY-QKTKPHMVESFRSCFKRYLTRKIGFEAV 828
            |:|.||||::.||||:|::..||::|.|.|:::|.| .:..|..|:..:...:||||||||||||
Human   684 QVAVDLFLLSGQYSDLASLGCISRYSAGSVYYYPSYHHQHNPVQVQKLQKELQRYLTRKIGFEAV 748

  Fly   829 MRIRCTRGLQVHTFHGNFFVRSTDLLSLPNVNPDAGYGMQISYEESLTDAKTICFQAALLYTNSE 893
            ||||||:||.:||||||||||||||||||||||||||.:|:|.||||||.:.:.||:|||||:|:
Human   749 MRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGYAVQMSVEESLTDTQLVSFQSALLYTSSK 813

  Fly   894 GERRIRVHTVCLPVTASLPEVMHSADTEAIIGLLSKMAVDRSVASNLSDARDAFINATIDVYNAF 958
            |||||||||:||||.::|.:|...||.:||.|||:.||||||:.::|||||||.:||.||..:|:
Human   814 GERRIRVHTLCLPVVSTLNDVFLGADVQAISGLLANMAVDRSMTASLSDARDALVNAVIDSLSAY 878

  Fly   959 KIAQNLPSGQSGQLIAPRSLALLPLYILALLKHPAFRVGTSTRLDDRVYAMDCMKTLPLDQLMKY 1023
            :  .::.|.|...|:.|.||.|.||::|||||..:|:.||:.|||:|::||..:|..||..||..
Human   879 R--SSVLSNQQPGLMVPFSLRLFPLFVLALLKQKSFQTGTNARLDERIFAMCQVKNQPLVYLMLT 941

  Fly  1024 VYPELYKIDALIYHARNSNISSNQDDDEDEDEPLPELPRLQLSAEHLDSRSIFLMDCGTLIMIYV 1088
            .:|.||::|.|          |::......|..:|:.|.||||.|.|.....||||.|:::|::|
Human   942 THPSLYRVDNL----------SDEGALNISDRTIPQPPILQLSVEKLSRDGAFLMDAGSVLMLWV 996

  Fly  1089 GLNVPPDVLEAVLGISSTAELGDYVYGLPNVVSNENDVLKRFILRLNYDKPYSALVQIIRDTSTA 1153
            |.|...:.|..|||:.:.|.:...:..||.:.:.|:..:..||..|...:|:..::.:|||.|..
Human   997 GKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLREQRPFFPILYVIRDESPM 1061

  Fly  1154 KGQFTERLTDDRSESSLSYYEFLQHIRAQV 1183
            |..|.:.:.:||:||:|||||||.||:.||
Human  1062 KANFLQNMIEDRTESALSYYEFLLHIQQQV 1091

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec24ABNP_610531.1 PHA03247 <72..426 CDD:223021 100/429 (23%)
COG5028 383..1184 CDD:227361 407/804 (51%)
SEC24ANP_068817.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29 7/24 (29%)
Atrophin-1 <55..>159 CDD:460830 39/166 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 60..168 39/179 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 189..226 13/40 (33%)
COG5028 237..1093 CDD:227361 419/877 (48%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 294..328 13/38 (34%)
Zinc finger-like 431..455 17/23 (74%)
Gelsolin-like. /evidence=ECO:0000255 966..1038 25/71 (35%)

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