DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG12744 and CG4374

DIOPT Version :9

Sequence 1:NP_610530.1 Gene:CG12744 / 36024 FlyBaseID:FBgn0033459 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_001262874.1 Gene:CG4374 / 42767 FlyBaseID:FBgn0039078 Length:772 Species:Drosophila melanogaster


Alignment Length:55 Identity:15/55 - (27%)
Similarity:27/55 - (49%) Gaps:9/55 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 CLLCEQTFDATEKLDEHLPTHFPQPVSTGQ---TCDICGRTMRSSLELHQHYKRY 63
            |.:|.:.|.....::.|:.||      ||:   .|.:||::.|....|.:||:.:
  Fly   651 CSICAKGFKDKYSVNVHIRTH------TGEKPFACSLCGKSFRQKAHLAKHYQTH 699

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12744NP_610530.1 C2H2 Zn finger 12..32 CDD:275368 4/19 (21%)
C2H2 Zn finger 43..64 CDD:275368 7/21 (33%)
C2H2 Zn finger 77..96 CDD:275368
CG4374NP_001262874.1 zf-C2H2 649..671 CDD:278523 4/19 (21%)
C2H2 Zn finger 651..671 CDD:275370 4/19 (21%)
zf-H2C2_2 663..688 CDD:290200 8/30 (27%)
C2H2 Zn finger 679..699 CDD:275370 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S5639
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.950

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