DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG12744 and CG12299

DIOPT Version :9

Sequence 1:NP_610530.1 Gene:CG12744 / 36024 FlyBaseID:FBgn0033459 Length:160 Species:Drosophila melanogaster
Sequence 2:NP_609448.1 Gene:CG12299 / 34483 FlyBaseID:FBgn0032295 Length:736 Species:Drosophila melanogaster


Alignment Length:116 Identity:39/116 - (33%)
Similarity:56/116 - (48%) Gaps:18/116 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 EVQLSCLLCEQTFDATEKLDEHLPTHF-PQPVSTGQTCDICGR--TMRSSLELHQHYKRYHEAHV 68
            |:...|.:|.:.|.|:.:|.:|:..|. .:|.    ||.:|.|  |...||.:|.   |.|....
  Fly   392 ELVYQCAICREAFRASSELVQHMKNHMGEKPF----TCSLCDRSFTQSGSLNIHM---RIHTGEK 449

  Fly    69 PNTEGHFQCQLCDKVFLLQDHLKVHVKIEHATDGYQPDEKSLDWQHYSPRS 119
            |     |||:||||.|.....|.||:|| ||  |.:|....:..:.||.::
  Fly   450 P-----FQCKLCDKCFTQASSLSVHMKI-HA--GEKPYPCPICGKSYSQQA 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG12744NP_610530.1 C2H2 Zn finger 12..32 CDD:275368 6/19 (32%)
C2H2 Zn finger 43..64 CDD:275368 8/22 (36%)
C2H2 Zn finger 77..96 CDD:275368 9/18 (50%)
CG12299NP_609448.1 COG5048 <254..413 CDD:227381 6/20 (30%)
C2H2 Zn finger 256..276 CDD:275368
zf-H2C2_2 268..293 CDD:290200
C2H2 Zn finger 284..304 CDD:275368
zf-H2C2_2 296..321 CDD:290200
zf-C2H2_2 312..>387 CDD:289522
C2H2 Zn finger 312..332 CDD:275368
C2H2 Zn finger 340..360 CDD:275368
C2H2 Zn finger 369..389 CDD:275368
C2H2 Zn finger 397..417 CDD:275368 6/19 (32%)
zf-H2C2_2 409..434 CDD:290200 8/28 (29%)
C2H2 Zn finger 425..445 CDD:275368 8/22 (36%)
zf-H2C2_2 437..462 CDD:290200 14/32 (44%)
C2H2 Zn finger 453..473 CDD:275368 11/20 (55%)
zf-H2C2_2 465..490 CDD:290200 10/27 (37%)
C2H2 Zn finger 481..501 CDD:275368 2/12 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.