Protein Alignment Lime and CG11456

DIOPT Version :10

• Sequence 1: NP_610529.1
• Gene: Lime / 36023
• FlyBaseID: FBgn0033458
• Length: 487
• Species: Drosophila melanogaster
• Sequence 2: NP_649265.1
• Gene: CG11456 / 40309
• FlyBaseID: FBgn0037031
• Length: 445
• Species: Drosophila melanogaster
• Alignment Length: 396
• Identity: 67/396 - (16%)
• Similarity: 117/396 - (29%)
• Gaps: 154/396 - (38%)

  Fly    81 CYLCKQPFNDIESFKEHLTQ-HAAEINAWNNTRAQEQTPPPTITPFVQSMNKPFVHPTDQHLFHS 144
            |.||.:.::..|..:.||.. |..|               |..||.|:  ||.....|.:.....
  Fly    11 CSLCLRQYDLQEDLRGHLVYFHGYE---------------PISTPSVK--NKTAKTSTKEQTAAG 58

  Fly   145 IDHGD----MDHHHNAHYRNRMEFGCPPPMDFYSPP------------LEP-----EIPF----- 183
            .:..|    ::...|:.         ||..:....|            |||     |.||
  Fly    59 SNSQDKQTVVERSENSE---------PPASELQPMPFKDFRLVLRANMLEPCSFGKECPFKFQDA 114

  Fly   184 ----------------------QMP-----AVH---QHPIQIPPMYMTAQHTAYEPPVQFLGHRP 218
                                  ::|     :.|   .|.:.:..:........|:.|:..|..|.
  Fly   115 TKMELHCSCHKGGSFSCCECGMELPNWRRCSAHLWKAHQVDVDLLVCPVFECNYKSPISALVWRH 179

  Fly   219 LEL-----------------RQKL-PMSPQSPLEPSGHPMASAIPSNQHTSLEMQNLCVPEGILT 265
            :::                 |:|| ..|.:...:|:..|.:|  ..|::.:.:...:|..:.:
  Fly   180 MQVHKKWRPRVLRSLAAVQRRRKLKEQSAEMAAQPAALPPSS--KKNKYYAEKTCEICNRKFV-- 240

  Fly   266 RVEEPPVLENPRPQAQDPIQDAGAGKSRSAVLIEPKPPNAKSLAFNQGQFECNWCGKRLSSRQSL 330
                                   .||:.|        .:.|::......|.||.|||:.:.:.||
  Fly   241 -----------------------NGKTLS--------KHVKTVHNKIKPFICNVCGKKTARKASL 274

  Fly   331 KYHESHFHGNK-----ELAVNRLEKNLTKQH-------------KCLTCKKRYKRRTFLLMHMKV 377
            ..|.....|.|     |...:..:.::..:|             ||..|.....:...|..||::
  Fly   275 IIHMRQHTGEKPLQCGECKFSTRDPSVLHKHRQRHDSQDTRSSLKCSQCDYFCIQANALKRHMRL 339

  Fly   378 KHGIAF 383
            .|..|:
  Fly   340 NHAEAY 345

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Lime	NP_610529.1	PAT1	<112..>239	CDD:401645	30/200 (15%)
		C2H2 Zn finger	317..336	CDD:275368	8/18 (44%)
		C2H2 Zn finger	358..377	CDD:275368	5/18 (28%)
CG11456	NP_649265.1	SUF4-like	232..>280	CDD:411020	14/80 (18%)
		C2H2 Zn finger	232..253	CDD:411020	5/53 (9%)
		C2H2 Zn finger	232..253	CDD:275368	5/53 (9%)
		C2H2 Zn finger	261..281	CDD:275368	8/19 (42%)
		C2H2 Zn finger	261..280	CDD:411020	8/18 (44%)
		C2H2 Zn finger	289..309	CDD:275368	2/19 (11%)