DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lime and Zfp451

DIOPT Version :10

Sequence 1:NP_610529.1 Gene:Lime / 36023 FlyBaseID:FBgn0033458 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_001028877.2 Gene:Zfp451 / 316312 RGDID:1305865 Length:1052 Species:Rattus norvegicus


Alignment Length:514 Identity:105/514 - (20%)
Similarity:164/514 - (31%) Gaps:180/514 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 SPTDPTDMPLVKEILARSEHINVPEGTVLCVPCYLCKQPFNDIESFKEHLTQHAAEINAWNNTRA 113
            ||.|||       |.......||       ..|.:|.:.|...:.:|:||...||..:..:|   
  Rat   196 SPCDPT-------ITLHGPLANV-------FACAVCYEHFVTQQQYKDHLLSKAAAADGHSN--- 243

  Fly   114 QEQTPPPTITPFV--------QSMNKPFVHPTDQHLFH-SIDHGDMDHHHNAHYRNRMEFGCPPP 169
              ..||..|..|.        .:.::...|.:.::.|| |:..||             :.|...|
  Rat   244 --DLPPQIIQCFACPHCFLLFSTKDECLKHMSAKNHFHQSLKLGD-------------DKGTARP 293

  Fly   170 MDFYS------PPLEPEIPFQMPAVHQHPIQIPPMYMTAQHTAYEPPVQFLGHRPLELRQKL--- 225
            :.|.|      ..|..::||.:..|..|......|.::|...     |:.....|:.:.:|.   
  Rat   294 VSFPSFAKKLLVSLCKDVPFLVKCVACHQTLRSHMELSAHFR-----VRCRNAGPVAIAEKSITQ 353

  Fly   226 --------------------PMSPQSPLEPSGHPMASAIPSNQHTSLEMQNL--C-VPEGILTRV 267
                                ..|.||...| ||.|:.|      .|:|...|  | :.||     
  Rat   354 VAKEFLVRGYCSDCNQVFMDEASTQSHKNP-GHKMSFA------NSVEESVLLYCHISEG----- 406

  Fly   268 EEPP----------------VLENPRPQAQD---PIQDAGAG-----------KSRSAV------ 296
            ..||                :|.:....|:|   |.:....|           :.||.|      
  Rat   407 SRPPCDLHLFNQPKISSLKRILSSKESSAEDCVIPTKKVNLGVDSQGGTARVQRQRSTVTAWFCE 471

  Fly   297 ---------LIEPKPPNAKSLAFNQGQFECNWCGKRLSSRQSLKYHESHFHGNKELAVNRLEKNL 352
                     .:|....:|.::.     ::|..|||.......::.|.|.|||...|      .|.
  Rat   472 CSRRFPSEDAVEKHVFSANTMC-----YKCVVCGKVCEDSGVMRLHMSRFHGGAHL------NNF 525

  Fly   353 TKQHKCLTCKKRYKRRTFLLMHMKVKHG------------IAFPGRVNADPEYPKSVDSPVSAKV 405
            .  ..|..|||...|:..::.|:...|.            .|.|.         .|.::.::|..
  Rat   526 L--FWCRMCKKELIRKDAIMAHVTEFHSGHRYFYEMDEVEAAVPS---------SSTENHLNADK 579

  Fly   406 PVSPMS----SPNEAPKKEIWSTRI----FNAVAAAKYQPA---SERADKYLVAPRQQT 453
            |.||::    ||..:|.:..|..||    |::....:...|   |.|..:|..|..::|
  Rat   580 PPSPIAVVDHSPASSPPRGRWQCRICEDMFDSHECVQQHCASLTSHRFHRYSCAHCRKT 638

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LimeNP_610529.1 PAT1 <112..>239 CDD:401645 29/164 (18%)
C2H2 Zn finger 317..336 CDD:275368 5/18 (28%)
C2H2 Zn finger 358..377 CDD:275368 6/18 (33%)
Zfp451NP_001028877.2 PIN_ZNF451-like 879..995 CDD:350288
Blue background indicates that the domain is not in the aligned region.

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