DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lime and ztf-25

DIOPT Version :10

Sequence 1:NP_610529.1 Gene:Lime / 36023 FlyBaseID:FBgn0033458 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_507456.1 Gene:ztf-25 / 180158 WormBaseID:WBGene00012405 Length:244 Species:Caenorhabditis elegans


Alignment Length:192 Identity:41/192 - (21%)
Similarity:64/192 - (33%) Gaps:57/192 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   299 EPKPPNAKSLAFNQGQFECNWCGKRLSSRQSLKYHESHFHGNKELAV---------------NRL 348
            |.|.|:.:      |:|.|..||:......||..|....|||:...:               .|.
 Worm    15 ELKRPDLR------GKFICASCGQHFQHNASLNRHRRLLHGNEHTCMMCDRKLNAKETIRDHMRN 73

  Fly   349 EKNLTKQHKCLTCKKRYKRRTFLLMHMKVKHGIAFPG------------------RVNADPEYPK 395
            |.||.:...|..|...:..:..|..|.|...|...||                  .:...|...|
 Worm    74 EHNLFQVFTCGCCNWSFSSKRQLSEHTKCIQGTGAPGDTIPIAKSCNAPGSLIQSTIQGTPPVVK 138

  Fly   396 -------------SVDSPVSAK-VPVSPMSSPNEAPKKEIWSTRIFNAVAAAK---YQPASE 440
                         ||.:.:|:: |..||..:..||.:|.::...: :.:..:|   ||..:|
 Worm   139 TGRKRGGSLSSSSSVSTSISSRDVSGSPPPTEEEAERKVLFDNAV-DTILQSKFFTYQQITE 199

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LimeNP_610529.1 PAT1 <112..>239 CDD:401645
C2H2 Zn finger 317..336 CDD:275368 6/18 (33%)
C2H2 Zn finger 358..377 CDD:275368 4/18 (22%)
ztf-25NP_507456.1 COG5236 <22..>122 CDD:227561 23/105 (22%)
C2H2 Zn finger 27..48 CDD:275368 6/20 (30%)
C2H2 Zn finger 54..75 CDD:275368 1/20 (5%)
C2H2 Zn finger 83..102 CDD:275368 4/18 (22%)
Blue background indicates that the domain is not in the aligned region.

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