DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lime and LOC1269713

DIOPT Version :10

Sequence 1:NP_610529.1 Gene:Lime / 36023 FlyBaseID:FBgn0033458 Length:487 Species:Drosophila melanogaster
Sequence 2:XP_308362.5 Gene:LOC1269713 / 1269713 VectorBaseID:AGAMI1_012709 Length:525 Species:Anopheles gambiae


Alignment Length:403 Identity:80/403 - (19%)
Similarity:131/403 - (32%) Gaps:130/403 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 EGTVLCVPCYLCKQPFN----DIESFKEHLTQHAAEINAWNNTRAQEQT------PPPTITPFVQ 127
            |...:|..|:...|.|:    :||:.::   ||..|:.|..:.:.:|.|      .|...|.|.:
Mosquito    46 ENASICSKCWSALQEFHKYYCEIEAVRQ---QHEHELLAIGDKQQEEVTVVCDSLEPSYRTEFFE 107

  Fly   128 SMNKPFVHPTDQHLFHSIDHGDMDHHHNAHYRNRMEFGC------PPPMDFYSPPLEPEIPFQMP 186
            ...:||            :..|:....|::..:.....|      .||:|     |:|..|..  
Mosquito   108 VKVEPF------------EQTDVFEQENSNCSDEKPLHCAFVKCEEPPID-----LDPTAPSS-- 153

  Fly   187 AVHQHPIQIPPMYMTAQHTAYEPPVQFLGHR-----PLELRQKLPMSPQSPLEPSGHPMASAIPS 246
               ....::|.                 |.|     |...:.|...:|:.|.........|.:.:
Mosquito   154 ---GEDSEVPQ-----------------GSRSDSSSPDRRKPKRERNPKRPQTSDNETKQSKVAA 198

  Fly   247 NQHTSLEMQN--------LCVPEGILTRVEEP---------------------------PVLENP 276
            .:.....:.|        :|..:.:|  |.||                           ||.|..
Mosquito   199 QKEEDESLHNFYKRIVCEVCDIQRML--VGEPQIDFGTWRALLRHTKEVHKHDKVYVKCPVCEMK 261

  Fly   277 RPQAQDPIQ----DAGAGKSRSAVLIEPKPPNAKSLAFN---QGQFECNWCGKRLSSRQSLKYHE 334
            ....|..:|    .....|.|..:..| |..|.|....|   :.||.|:.|||:...::.|..|.
Mosquito   262 MRTKQTLLQHMDWHENPEKYRCELCGE-KHQNMKEHIQNKHQERQFCCDVCGKKFPFKKRLTVHM 325

  Fly   335 SHFHGNKELAVNRLEKNLTK----QHK---------CLTCKKRYKRRTFLLMHMK-----VKHGI 381
            ...|..|::..::.:|..||    .||         |..|.|.:..|..||.||:     :::..
Mosquito   326 KKMHVEKDIICDQCQKPFTKYTIEDHKRSVHSARFVCEHCPKTFNSRFRLLQHMEEHDESLRNST 390

  Fly   382 AFP----GRVNAD 390
            :.|    |:|..|
Mosquito   391 SVPCTICGQVMRD 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LimeNP_610529.1 PAT1 <112..>239 CDD:401645 23/143 (16%)
C2H2 Zn finger 317..336 CDD:275368 6/18 (33%)
C2H2 Zn finger 358..377 CDD:275368 8/23 (35%)
LOC1269713XP_308362.5 None

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