DRSC/TRiP Functional Genomics Resources

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Protein Alignment Lime and Zbtb21

DIOPT Version :9

Sequence 1:NP_610529.1 Gene:Lime / 36023 FlyBaseID:FBgn0033458 Length:487 Species:Drosophila melanogaster
Sequence 2:NP_780637.2 Gene:Zbtb21 / 114565 MGIID:1927240 Length:1094 Species:Mus musculus


Alignment Length:474 Identity:90/474 - (18%)
Similarity:162/474 - (34%) Gaps:140/474 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 TDPTDMPLVKEILARSEHINVPEGTVLCVPCYLCKQPFNDIESFKEHLTQHAAEINAWNNTRAQE 115
            :.|....:.:.:.:|:      :|..:|.   .|.:.:..:..||:|:..|..| .....:||.:
Mouse   682 SSPAQQVIKRNLRSRA------KGAYICA---YCGKAYRFLSQFKQHIKMHPGE-RPLGVSRAAK 736

  Fly   116 QTPPPTITPFVQSMNKPFVHP---TDQHLFHSIDHGDMDHHHNAHYRNRMEFGCP-PPMDFYSPP 176
                |......:::....|:|   .:..|...::.|    :|....||...  || ..:.|:||.
Mouse   737 ----PKERALARAVENKEVYPCRLCNAKLSSLLEQG----NHERLCRNATV--CPYCSLRFFSPA 791

  Fly   177 LEPEIPFQMPAVHQHPIQIPPMYMTAQHTAYEPPVQFLGHRPLELRQKLPMS-----PQSPLEPS 236
            |:.|        |:...:...:........::.......|: :|:..:..|:     ..:.|:.:
Mouse   792 LKQE--------HEDRCEYKKLTCLECMRTFKSSFSIWRHQ-VEVHNQNNMALAENFALATLDHN 847

  Fly   237 GHPMASAIPSNQHT----------------SLEMQNL------CVPEG------ILTRVEEPPV- 272
            |...|::.|..:.:                |.|..|.      |:||.      :..:|:|.|| 
Mouse   848 GEVAAASRPQTEPSKVNHVATPKEDTAFSDSSEQVNFDSEDSSCLPEDLSLSKQLKVQVKEEPVE 912

  Fly   273 -LENPRPQAQDPIQDAGAGKSRSAVLIEPKPPNAKSLAFNQGQFECNWCGKRLSSRQSLKYHESH 336
             .|...|:|....::||..|                   ..|.:.|..|||..::.:.|:.|:  
Mouse   913 EAEEEAPEASAAPREAGPSK-------------------ETGLWPCEKCGKMFTAHKQLERHQ-- 956

  Fly   337 FHGNKELAVNRLEKNLTKQHKCLTCKKRYKRRTFLLMHMKVKHGIAFPGRVNADPEY-PKSVDSP 400
                 ||..:      .|...|..|.|.::....|..|.:.....|....|..:.|. |...:||
Mouse   957 -----ELLCS------VKPFICHVCYKAFRTNFRLWSHFQTHMSQATEEPVQKESEVCPVPTNSP 1010

  Fly   401 VSAKVP-------VSPM--SSPNEAPKKEIWSTRIFNAVAAAKYQPASERADKYLVAPRQQTEQL 456
            ....:|       :.|:  .||...|:..               .||:|:    |.|| |:::.|
Mouse  1011 SPPPLPPPPPLPKIQPLEPDSPTGLPENP---------------TPATEK----LFAP-QESDTL 1055

  Fly   457 ESGF-------TITSKRTY 468
               |       .||.||.:
Mouse  1056 ---FYHAPPLSAITFKRQF 1071

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LimeNP_610529.1 C2H2 Zn finger 317..336 CDD:275368 6/18 (33%)
C2H2 Zn finger 358..377 CDD:275368 5/18 (28%)
Zbtb21NP_780637.2 BTB_POZ_ZBTB21_ZNF295 40..151 CDD:349518
SUF4-like 576..>629 CDD:411020
C2H2 Zn finger 579..600 CDD:411020
C2H2 Zn finger 579..600 CDD:275368
C2H2 Zn finger 608..629 CDD:411020
zf-C2H2 701..723 CDD:395048 5/24 (21%)
C2H2 Zn finger 703..723 CDD:275370 5/22 (23%)
zf_C2H2_6 776..803 CDD:408245 9/36 (25%)
C2H2 Zn finger 939..959 CDD:275370 7/26 (27%)
C2H2 Zn finger 967..988 CDD:275370 5/20 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24408
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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