DRSC/TRiP Functional Genomics Resources

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Protein Alignment PCB and aceF

DIOPT Version :10

Sequence 1:NP_724841.1 Gene:PCB / 36020 FlyBaseID:FBgn0027580 Length:1197 Species:Drosophila melanogaster
Sequence 2:NP_414657.1 Gene:aceF / 944794 ECOCYCID:EG10025 Length:630 Species:Escherichia coli


Alignment Length:178 Identity:56/178 - (31%)
Similarity:79/178 - (44%) Gaps:21/178 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly  1032 PQVTNDFLNFRE---KYGPVDKLDTR---IFLTGPKVGEEFDVPLERGKTLSVKALAVS-ADLKP 1089
            |.:.:|.:...|   |.|  ||::..   |.:.|.|...|...|...    :||.:.|: .|...
E. coli   111 PDIGSDEVEVTEILVKVG--DKVEAEQSLITVEGDKASMEVPAPFAG----TVKEIKVNVGDKVS 169

  Fly  1090 NGIREVFFELNGQL-RAVHILDKEAVKEIHVHPKANKSNKSEVGAPMPG----TVIDIRVKVGDK 1149
            .|...:.||:.|:. .|.....:||.......|.|   ...||..|..|    .|.::.||||||
E. coli   170 TGSLIMVFEVAGEAGAAAPAAKQEAAPAAAPAPAA---GVKEVNVPDIGGDEVEVTEVMVKVGDK 231

  Fly  1150 VEKGQPLVVLSAMKMEMVVQSPLAGVVKKLEIANGTKLEGEDLIMIIE 1197
            |...|.|:.:...|..|.|.:|.|||||:|::..|.|::...||||.|
E. coli   232 VAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFE 279

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PCBNP_724841.1 PycA 37..1196 CDD:440660 54/175 (31%)
aceFNP_414657.1 aceF 1..630 CDD:236999 56/178 (31%)

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