DRSC/TRiP Functional Genomics Resources

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Protein Alignment PCB and mccc-1

DIOPT Version :10

Sequence 1:NP_724841.1 Gene:PCB / 36020 FlyBaseID:FBgn0027580 Length:1197 Species:Drosophila melanogaster
Sequence 2:NP_501777.2 Gene:mccc-1 / 177841 WormBaseID:WBGene00009319 Length:671 Species:Caenorhabditis elegans


Alignment Length:763 Identity:260/763 - (34%)
Similarity:379/763 - (49%) Gaps:136/763 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 KPIRSVLVANRGEIAIRVFRACTELGIKSVAVYSEQDKMHMHRQKADESYIVGKGLPPV--EAYL 99
            :||:.|||||||||||||.....::||::|||:|:.|:..:..:|||::|.:|   ||:  |:||
 Worm    17 RPIQRVLVANRGEIAIRVQNTARKMGIETVAVFSDADRNSLFVKKADKAYHIG---PPLAAESYL 78

  Fly   100 NIPELIRVCKENDVDAVHPGYGFLSERSDFAQAVIDAGLRFIGPSPEVVQKMGDKVAARVAAIEA 164
            |:.::|.....:...|:|||||||||.:.||:....|||.||||..:.::.||.|..::....:|
 Worm    79 NMDKIINSALRSGAQAIHPGYGFLSENAGFAEKCAQAGLVFIGPPAQAIRDMGAKNVSKQIMEDA 143

  Fly   165 GVPIVPGTDG----PVTTKEEALEFCKKHGLPVIFKAAYGGGGRGMRVVRKMEDVEESFQRASSE 225
            .||:|.|..|    ....|:::.|.    |.||:.||.|||||:|||:.....:.||....|.:|
 Worm   144 KVPVVKGFHGEDQSDANLKKKSAEI----GYPVMLKAVYGGGGKGMRIAWNEAEFEEKLASARNE 204

  Fly   226 AKAAFGNGAMFIEKFIERPRHIEVQLLGDKAGNVVHLYERDCSVQRRHQKVVEIAPAPRLPIEIR 290
            ||.:|||..|.:|||:|:|||:|||:.||..||.|||:||||||||||||::|.||||.:..:.|
 Worm   205 AKKSFGNDEMLVEKFVEKPRHVEVQVFGDHHGNYVHLWERDCSVQRRHQKIIEEAPAPNMEHDTR 269

  Fly   291 DKMTEAAVRLARHVGYENAGTVEFLCDESGNFYFIEVNARLQVEHTVTEEITGIDLVQSQIRVAE 355
            .|:.|:|||.|..|||..||||||:.|..|.|||:|:|.||||||.|:|.|||.|||:.|:|||:
 Worm   270 VKLGESAVRAAAAVGYVGAGTVEFIMDPRGEFYFMEMNTRLQVEHPVSEAITGTDLVEWQLRVAQ 334

  Fly   356 GMTLPELGYTQDKIVPRGYAIQCRVTTEDPAND-FQPNTGRLEVFRSGEGMGIRLDSASAYAGAI 419
            |..||   ..|.:|...|:|.:|||..||.... |.|..|||......|  ..|:|: ...:|..
 Worm   335 GEKLP---LKQSEIPLNGHAFECRVYAEDTRKGAFMPTAGRLNYVDFPE--DARIDT-GVVSGDE 393

  Fly   420 ISPYYDSLLVKVISHASDLQSSASKMNRALREFRIRGVKTNIPFLLNVLENQKFLHGVLDTYFID 484
            :|.:||.::.||:....|...:|:|:..||...||.|:.|||.|:..||.:.:|..|.:.|.||.
 Worm   394 VSIHYDPMIAKVVVWGQDRAVAAAKLESALARTRISGLPTNIDFVRRVLAHPEFAAGNVYTDFIP 458

  Fly   485 EHPQLFKFKPSLNRAQKLLNYMGEVLVNGPQTPLATTLKPALVSPHVPEVPLDLSPEAIEREERG 549
            :|             ||.|....|       ||....::.|:.             .|:...::.
 Worm   459 DH-------------QKELFAESE-------TPAEIYVESAVA-------------HALAALQKS 490

  Fly   550 EAKVTE---------PPKGLREVLVCEGPEAFAKEVRNRKELLLMDTTFRDAHQSLLATRVRSHD 605
            :|.|.:         .||.:.::   :|                .|.:.|....|.|.       
 Worm   491 DAGVFQNLSFFRMNLSPKYIFKI---DG----------------KDVSIRFDSDSRLT------- 529

  Fly   606 LLKISPYVTHKFNNLYSLENWGGATFDVALRFLHECPWERLEEMRKRIPNIPFQMLLRGANAVGY 670
                   |::..|:..:|.|...:|.|.:.:|..|....|...:.|.:.|    .|:  .|.||.
 Worm   530 -------VSYDGNSYETLLNDIESTTDGSFKFTLEANGRRWSTVVKNLGN----SLM--VNGVGQ 581

  Fly   671 TSYPDNVVYKFCELAVQTGMDIFRVFDSLNYLPNLILGMEAAGKA----GGVVEAAISYTGDVSD 731
            ..|....:::              .||||:       |..|:..|    .|::|..:...|:...
 Worm   582 NEYETPQIHE--------------TFDSLS-------GGAASHSAVAPMPGIIEKILVKPGEQVT 625

  Fly   732 PKR-----TKYDLKYYTNLADELVKAGTHVLCIKDMAGLLKPESARLL 774
            ..:     |...::|.....::  ....|:.|   .||...|::|.|:
 Worm   626 TGQALVVMTAMKMEYIIRAPED--STVEHIKC---QAGKNVPKNAVLV 668

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PCBNP_724841.1 PycA 37..1196 CDD:440660 260/763 (34%)
mccc-1NP_501777.2 PccA 18..483 CDD:443802 215/510 (42%)
PRK05641 527..669 CDD:235540 36/188 (19%)
biotinyl_domain 606..670 CDD:133459 12/68 (18%)

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