DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and psma6l

DIOPT Version :10

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_571870.2 Gene:psma6l / 83917 ZFINID:ZDB-GENE-010502-2 Length:252 Species:Danio rerio


Alignment Length:197 Identity:65/197 - (32%)
Similarity:105/197 - (53%) Gaps:10/197 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GYDLSASQFSPDGRVFQIDYASKAVEKSG-TVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTI 70
            |:|...:.|||:||::|::||.||:.:|| |.:||||.|..||..:|.::..|.:......:|.|
Zfish     8 GFDRHITIFSPEGRLYQVEYAFKAISQSGLTTVGIRGVDCAVLVTQKKVSDTLLDASTMTNMFRI 72

  Fly    71 EKNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLS 135
            ...||..:.|..||.......||.||..::.:|...:|:..||.|:|.....||..:.:||.|..
Zfish    73 TPRIGCVMTGHYADSRSQVHRARIEAGEWKYKFGYDVPVDALCRRLADLSQVYTQNAEMRPLGCC 137

  Fly   136 IILASWDEVEGPQLYKIEPSGSSFGYFACASG---------KAKQLAKTEMEKLKMDMRTDELVE 191
            ::|.|.|..:||.|||.:|:|...|:.|.:.|         ..|::.|.:.:|.::::..|..|:
Zfish   138 MMLISMDPQKGPMLYKCDPAGYFCGFRATSVGVKHTEANSYLEKKIKKMQKKKEEVELDFDSSVQ 202

  Fly   192 SA 193
            .|
Zfish   203 MA 204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 65/197 (33%)
psma6lNP_571870.2 proteasome_alpha_type_6 8..226 CDD:239723 65/197 (33%)

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