DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and PBE1

DIOPT Version :10

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001184978.1 Gene:PBE1 / 837863 AraportID:AT1G13060 Length:298 Species:Arabidopsis thaliana


Alignment Length:219 Identity:55/219 - (25%)
Similarity:78/219 - (35%) Gaps:71/219 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 GKDAVVLAVEKIITSKLYEPDAGGRIFTIEKNIGMAVAGLVAD-----GNFVADIARQEAANYRQ 101
            |::....:|:|||....|             .:| .:||..||     .|........|.||.|:
plant   104 GRNTTSQSVKKIIEINPY-------------MLG-TMAGGAADCQFWHRNLGIKCRLHELANKRR 154

  Fly   102 QFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLSI--ILASWDEVEGPQLYKIE----------- 153
                 |.:......:|..:::|      |..|||:  ::|.|||. ||.||.::           
plant   155 -----ISVSGASKLLANMLYSY------RGMGLSVGTMIAGWDET-GPGLYYVDNEGGRLKGDRF 207

  Fly   154 --PSGSSFGYFACASGKAKQLAKTEMEKLKMDMRTDELVESAGEIIYKVHDELKDKDFRFEMGLV 216
              .|||.:.|....||            .|.||..:|..|.|...||  |...:|       |..
plant   208 SVGSGSPYAYGVLDSG------------YKYDMSVEEASELARRSIY--HATFRD-------GAS 251

  Fly   217 GRVTGGLHLINPSELTEKARKAGD 240
            |.|....| :.|...|   :.:||
plant   252 GGVASVYH-VGPEGWT---KLSGD 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 48/193 (25%)
PBE1NP_001184978.1 proteasome_beta_type_5 58..269 CDD:239730 53/215 (25%)

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