DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and PBB2

DIOPT Version :10

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_198874.1 Gene:PBB2 / 834056 AraportID:AT5G40580 Length:274 Species:Arabidopsis thaliana


Alignment Length:182 Identity:48/182 - (26%)
Similarity:75/182 - (41%) Gaps:37/182 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 KSG-TVIGIRGKDAVVLAVE------KIITSKLYEPDAGGRIFTIEKNIGMAVAGLVADGNFVAD 90
            |:| |::|:..||.|:|..:      .|:..|..|     :|..:..||....||..||...|.|
plant    37 KTGTTIVGLIFKDGVILGADTRATEGPIVADKNCE-----KIHYMAPNIYCCGAGTAADTEAVTD 96

  Fly    91 IARQEAANYRQQFEQ------AIPL--KHLCHRVAGYVHAYTLYSAVRPFGLSIILASWDEVEGP 147
            :...:...:|.|..:      |:.|  ||| ....|:|.|            :::|...| :.||
plant    97 MVSSQLRLHRYQTGRDSRVVTALTLLKKHL-FSYQGHVSA------------ALVLGGVD-ITGP 147

  Fly   148 QLYKIEPSGS--SFGYFACASGKAKQLAKTEMEKLKMDMRTDELVESAGEII 197
            .|:.|.|.||  :..:....||....::..| .|.|..:..||.::...|.|
plant   148 HLHTIYPHGSTDTLPFATMGSGSLAAMSVFE-AKYKEGLTRDEGIKLVAEAI 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 48/182 (26%)
PBB2NP_198874.1 proteasome_beta_type_7 40..228 CDD:239732 46/179 (26%)

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