DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and PAA1

DIOPT Version :10

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_198409.1 Gene:PAA1 / 833524 AraportID:AT5G35590 Length:246 Species:Arabidopsis thaliana


Alignment Length:237 Identity:80/237 - (33%)
Similarity:126/237 - (53%) Gaps:13/237 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GTGYDLSASQFSPDGRVFQIDYASKAVEKSG-TVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIF 68
            |.|||...:.|||:||:||::||.|||:.:| |.||:||||:|.:..:|.:..||.:..:...:|
plant     6 GAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLF 70

  Fly    69 TIEKNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFG 133
            .|.|.||:...|:.||...:...||.:||.:|..:...:|:..|...:|.....||.::.:||.|
plant    71 PITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLG 135

  Fly   134 LSIILASWDEVEGPQLYKIEPSGSSFGYFACASGKAKQLAKTEMEKLKM----DMRTDELVESAG 194
            :..::...||..||.|||.:|:|..:|:.|.::|..:|.|...:|| ||    ....||.|::|.
plant   136 VVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEK-KMKENPSFTFDETVQTAI 199

  Fly   195 EIIYKVHDELKDKDFR---FEMGLVGRVTGGLHLINPSELTE 233
            ..:..|..|    ||:   .|:|:|.........:...|:.|
plant   200 SALQSVLQE----DFKATEIEVGVVRAENPEFRALTTEEIEE 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 77/218 (35%)
PAA1NP_198409.1 proteasome_alpha_type_6 8..220 CDD:239723 76/216 (35%)

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