DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and Psmb11

DIOPT Version :10

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_780413.1 Gene:Psmb11 / 73902 MGIID:1921152 Length:302 Species:Mus musculus


Alignment Length:138 Identity:30/138 - (21%)
Similarity:51/138 - (36%) Gaps:14/138 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 TVIGIRGKDAVVLAVEKIITSKLYEP-DAGGRIFTIEKNIGMAVAGLVADGNFVADIARQEAANY 99
            |.:..|.:..|:.|.:...:...|.. .|..::..:.:.:....:|..||......:.|:| ...
Mouse    51 TTLAFRFRHGVIAAADTRSSCGSYVACPASRKVIPVHQRLLGTTSGTSADCATWYRVLRRE-LRL 114

  Fly   100 RQQFEQAIPLKHLCHRVAGYVHAY-TLYSAVRPFGLSI--ILASWDEVEGPQLYKIEPSGSSF-- 159
            |:..|..:|      .|||..... .:.|..|...|.:  .|..||. .||.|:.:...|:..  
Mouse   115 RELREGQLP------SVAGTAKLLAAMMSCYRGLDLCVATALCGWDH-SGPALFYVYSDGTCLQG 172

  Fly   160 GYFACASG 167
            ..|:..||
Mouse   173 DIFSVGSG 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 30/138 (22%)
Psmb11NP_780413.1 proteasome_beta_type_5 50..237 CDD:239730 30/138 (22%)

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