DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and psmb13a

DIOPT Version :9

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_571752.2 Gene:psmb13a / 64280 ZFINID:ZDB-GENE-001208-2 Length:281 Species:Danio rerio


Alignment Length:179 Identity:45/179 - (25%)
Similarity:69/179 - (38%) Gaps:29/179 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 KAVEKSGTVIGIRGKDAVVLAVEKIITS-KLYEPDAGGRIFTIEKNIGMAVAGLVADGNFVADI- 91
            ||::...|:.|:..||.|||..:...|| ::.......:|..|..||....||..||.....|: 
Zfish    39 KALKTGTTIAGVVFKDGVVLGADTRATSDEVVADKMCAKIHYIAPNIYCCGAGTAADTEKTTDML 103

  Fly    92 -------ARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLSIILASWDEVEGPQL 149
                   :.....|.|......| ::.:..|..|.:            |.::||...| ..|..|
Zfish   104 SSNLTIFSMNSGRNPRVVMAVNI-IQDMLFRYHGMI------------GANLILGGVD-CTGSHL 154

  Fly   150 YKIEPSGS--SFGYFACASGKAKQLAKTEMEKLKMDMRTDE---LVESA 193
            |.:.|.||  ...|.|..||....:...| ::.|::|..::   ||..|
Zfish   155 YTVGPYGSMDKVPYLAMGSGDLAAMGILE-DRFKVNMDLEQAKALVSDA 202

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 45/179 (25%)
PRE1 6..231 CDD:223711 45/179 (25%)
psmb13aNP_571752.2 proteasome_beta_type_7 45..233 CDD:239732 43/173 (25%)
Pr_beta_C 241..272 CDD:315191
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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