DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and PSMB1

DIOPT Version :10

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_002784.1 Gene:PSMB1 / 5689 HGNCID:9537 Length:241 Species:Homo sapiens


Alignment Length:223 Identity:41/223 - (18%)
Similarity:82/223 - (36%) Gaps:45/223 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 SASQFSPDGR-----------VFQIDYASKAVEKSGTVIGIRGKDAVVLAVEKIITS--KLYEPD 62
            |.:.:|..||           ..|:.: |..|...||::.|.|:|..::|.:..::.  .::..|
Human     4 STAMYSAPGRDLGMEPHRAAGPLQLRF-SPYVFNGGTILAIAGEDFAIVASDTRLSEGFSIHTRD 67

  Fly    63 AGGRIFTIEKNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYS 127
            : .:.:.:.....:..:|...|...:..|.......|:....:|:....:...::..:::...: 
Human    68 S-PKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFF- 130

  Fly   128 AVRPFGLSIILASWDEVEGPQLYKIEPSGS----SFGYFACASGKA--------------KQLAK 174
               |:.:..|:...||.....:|..:|.||    ||.    |.|.|              |.:..
Human   131 ---PYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFK----AGGSASAMLQPLLDNQVGFKNMQN 188

  Fly   175 TEMEKLKMD--MR--TDELVESAGEIIY 198
            .|...|.:|  ||  .|..:.:|...:|
Human   189 VEHVPLSLDRAMRLVKDVFISAAERDVY 216

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 41/223 (18%)
PSMB1NP_002784.1 proteasome_beta_type_1 30..241 CDD:239726 36/197 (18%)

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