DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and psma2

DIOPT Version :9

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001016382.1 Gene:psma2 / 549136 XenbaseID:XB-GENE-964711 Length:234 Species:Xenopus tropicalis


Alignment Length:228 Identity:76/228 - (33%)
Similarity:120/228 - (52%) Gaps:5/228 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GYDLSASQFSPDGRVFQIDYASKAVEKSGTVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTIE 71
            ||..|.:.|||.|::.||:||..||......:||:..:.||||.||...|.||:..:..::..|.
 Frog     5 GYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKATNGVVLATEKKQKSILYDEQSAHKVEPIT 69

  Fly    72 KNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLSI 136
            |:|||..:|:..|...:...||:.|..|...:::.||...|..|||..:..||....|||||:|:
 Frog    70 KHIGMVYSGMGPDYRVLVRRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSL 134

  Fly   137 ILASWDEVEGPQLYKIEPSGSSFGYFACASGKAKQLAKTEMEK-LKMDMRTDELVESAGEIIYKV 200
            ::|.|||.. |.|::.:|||:.|.:.|.|.||.....||.:|| ...|:..::.:.:| .:..|.
 Frog   135 LIAGWDEGR-PYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTA-ILTLKE 197

  Fly   201 HDELKDKDFRFEMGLVGRVTGGLHLINPSELTE 233
            ..|.:..:...|:|:...  .|...:.|:|:.:
 Frog   198 SFEGQMTEDNIEVGICNE--AGFKRLTPAEVKD 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 73/209 (35%)
PRE1 6..231 CDD:223711 75/224 (33%)
psma2NP_001016382.1 proteasome_alpha_type_2 6..231 CDD:239719 75/227 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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