DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and psma4

DIOPT Version :10

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001007998.1 Gene:psma4 / 493360 XenbaseID:XB-GENE-5837209 Length:261 Species:Xenopus tropicalis


Alignment Length:251 Identity:72/251 - (28%)
Similarity:128/251 - (50%) Gaps:7/251 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDLSASQFSPDGRVFQIDYASKAVEKSGTVIGIRGKDAVVLAVEKIITSKLY-EPDAGGRIFTIE 71
            ||...:.|||:||::|::||.:|:..:||.:||...|.|:||.|:....||. |.....:|:.:.
 Frog     5 YDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLN 69

  Fly    72 KNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLSI 136
            .::..:|||:.:|.|.:.:..|..|..|..|:::.||.:.|...:.....|||.:...||||:|:
 Frog    70 DDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSL 134

  Fly   137 ILASWDEVEGPQLYKIEPSGSSFGYFACASG--KAKQLAKTEMEKLKMDMRTDELVESAGEIIYK 199
            :...||:..|.|||:.:|||:..|:.|...|  .|..::..:.:..:.||.....:..|.:::.|
 Frog   135 LYIGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAAVSMLKQDYKEGDMTLKSALALAVKVLNK 199

  Fly   200 VHDELKDKDFRFEMGLVGRVTG--GLHLINPSELTE--KARKAGDAANKDEDSDNE 251
            ..|..|....:.|:..:.|..|  .:.::...|:.|  |..:..:|..:.|..:.|
 Frog   200 TMDVSKLSAEKVEIATLTRENGKTKIRVLKQKEVEELIKLHEEEEAKIEREKKEKE 255

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 64/210 (30%)
psma4NP_001007998.1 proteasome_alpha_type_4 3..216 CDD:239721 64/210 (30%)

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