DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and psmb11a

DIOPT Version :10

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001007179.1 Gene:psmb11a / 446135 ZFINID:ZDB-GENE-040724-32 Length:375 Species:Danio rerio


Alignment Length:204 Identity:42/204 - (20%)
Similarity:75/204 - (36%) Gaps:48/204 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TGYDLSASQFSPDGRVFQIDYASKAVEKSGTVIGIRGKDAVVLAVEKIITSK-LYEPDAGGRIFT 69
            |...|.:|..||..:.|.:.:.:       |.:|...:|.|:.|.:...:.| |.......:|..
Zfish    56 TASTLFSSTLSPHEQPFHLSHGT-------TTLGFIFQDGVIAAADTRASCKGLVCCPITHKIMP 113

  Fly    70 IEKNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVH--AYTLYSAVRPF 132
            |..::.:..:|..||......|..:|...|:           |.||....::  |..|.:.:.||
Zfish   114 IHSHLVVNTSGSGADCMLWERILTREMRLYQ-----------LRHRTRLSINGAAKLLSTMLHPF 167

  Fly   133 -GLSIILAS----WDEVEGPQLYKIEPSGSSFGYF-----------------ACASGKAKQLAKT 175
             |.::.:|:    ||..|....:|     :|.|..                 ..|.|..|:.:.:
Zfish   168 KGTNVCVAATLCGWDGEESQIQWK-----TSMGTVNVNESMAQDSTLSAISDESALGSEKRASIS 227

  Fly   176 EMEKLKMDM 184
            |.|::..|:
Zfish   228 EQEEILKDV 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 42/204 (21%)
psmb11aNP_001007179.1 proteasome_beta_type_5 78..330 CDD:239730 36/182 (20%)

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