DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and psma6b

DIOPT Version :9

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001002589.1 Gene:psma6b / 436862 ZFINID:ZDB-GENE-040718-329 Length:246 Species:Danio rerio


Alignment Length:229 Identity:74/229 - (32%)
Similarity:126/229 - (55%) Gaps:5/229 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GYDLSASQFSPDGRVFQIDYASKAVEKSG-TVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTI 70
            |:|...:.|||:||::|::||.||:.:.| |.:.:||||..::..:|.:..||.:......:|.|
Zfish     8 GFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAIVVTQKKVPDKLLDSSTVTHLFRI 72

  Fly    71 EKNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLS 135
            .:|||..::|:.||.......||.||||::.::...||:..||.|:|.....||..:.:||.|..
Zfish    73 TENIGCVMSGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCC 137

  Fly   136 IILASWDEVEGPQLYKIEPSGSSFGYFACASGKAKQLAKTEME---KLKMDMRTDELVESAGEII 197
            :|:...||..|||:||.:|:|...|:.|.|:|..:..|.:.:|   |.|:|...::.||:|...:
Zfish   138 MIVIGLDEELGPQVYKCDPAGYYCGFKATAAGVKQTEATSFLEKKVKKKLDWTFEQAVETAITCL 202

  Fly   198 YKVHDELKDKDFRFEMGLVGRVTGGLHLINPSEL 231
            ..|. .:..|....|:|::........:::.||:
Zfish   203 TTVL-SIDFKPSELEIGVITAEDPKFRILSESEV 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 72/212 (34%)
PRE1 6..231 CDD:223711 73/227 (32%)
psma6bNP_001002589.1 PRE1 7..245 CDD:223711 74/229 (32%)
proteasome_alpha_type_6 8..220 CDD:239723 72/212 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

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