DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and psmb10

DIOPT Version :10

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001002543.2 Gene:psmb10 / 436816 ZFINID:ZDB-GENE-040718-278 Length:276 Species:Danio rerio


Alignment Length:244 Identity:54/244 - (22%)
Similarity:82/244 - (33%) Gaps:82/244 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 YASKAVEKSGTVI-GIRGKDAVVLAVEKIITSKLYEPDAG-GRIFTIEKNIGMAVAGLVADGN-- 86
            |::....|:||.| |:..||.|:|..:...|..:...|.. .:|..|..||....||:.||..  
Zfish    33 YSAPNARKTGTTIAGLVFKDGVILGADTRATDDMVVADKNCMKIHYIAPNIYCCGAGVAADAEVT 97

  Fly    87 -------------------FVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPF 132
                               .||.:.||              ||.:..|..|::            
Zfish    98 TQMMSSNVELHSLSTGRPPLVAMVTRQ--------------LKQMLFRYQGHI------------ 136

  Fly   133 GLSIILASWDEVEGPQLYKIEPSGS--SFGYFACASGKAKQLA--------KTEMEKLKMDMR-- 185
            |.|:|:...| |.|.|||.:.|.||  ...:....||.|..::        ..|:|:.|..:|  
Zfish   137 GSSLIVGGVD-VNGAQLYSVYPHGSYDKLPFLTMGSGAASAISVFEDRYKPNMELEEAKQLVRDA 200

  Fly   186 --------------------TDELVESAGEIIYKVHDELKDKDFRFEMG 214
                                ||:.|:........||...:...:|::.|
Zfish   201 ITAGIFCDLGSGSNVDLCVITDKKVDYLRTYDQPVHKNQRGGTYRYKPG 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 54/244 (22%)
psmb10NP_001002543.2 proteasome_beta_type_7 43..231 CDD:239732 47/214 (22%)
Pr_beta_C 234..270 CDD:463597 4/16 (25%)

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