DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha7 and Prosbeta3

DIOPT Version :10

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_649858.1 Gene:Prosbeta3 / 41079 FlyBaseID:FBgn0026380 Length:205 Species:Drosophila melanogaster


Alignment Length:215 Identity:45/215 - (20%)
Similarity:84/215 - (39%) Gaps:34/215 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 GTVIGIRGKDAVVLAVEKI--ITSKLYEPDAGGRIFTIEKNIGMAVAGLVADGNFVADIARQEAA 97
            |.|:.:||||.|.:|.:..  |.::....|. .::|.|...:.:.:.||..|...|.|     ..
  Fly     9 GCVVAMRGKDCVAIATDHRFGIQAQTISTDF-KKVFHIGPRMFLGLTGLQTDILTVRD-----RL 67

  Fly    98 NYRQQFEQAIPLKHLCHRVAGYVHAYTLYS-AVRPFGLSIILASWDEVEGPQLYKIEPSGSSFGY 161
            .:|:...:....:.:|.:....:.:..||. ...|:.:..::|..|    |:  .:||...:...
  Fly    68 MFRKNLYETRENREMCPKPFSAMMSSFLYEHRFGPYFIEPVVAGLD----PK--TMEPFICNMDL 126

  Fly   162 FACASGKAK-QLAKTEMEKL--------KMDMRTDELVESAGEIIYKVHDELKDKDFRFEMGLVG 217
            ..|.:.... .:|.|..|:|        |.|:..|:|.|...:.|....    |:|.....|.. 
  Fly   127 IGCPNAPDDFVVAGTCAEQLYGMCETLWKPDLEPDQLFEVIAQSIVNAF----DRDAMSGWGAT- 186

  Fly   218 RVTGGLHLINPSELTEKARK 237
                 :::|...::||:..|
  Fly   187 -----VYIIEKDKITERTLK 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 41/192 (21%)
Prosbeta3NP_649858.1 proteasome_beta_type_3 6..201 CDD:239728 44/213 (21%)

Return to query results.
Submit another query.