DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and psma6

DIOPT Version :9

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_989113.1 Gene:psma6 / 394718 XenbaseID:XB-GENE-943786 Length:246 Species:Xenopus tropicalis


Alignment Length:214 Identity:70/214 - (32%)
Similarity:119/214 - (55%) Gaps:5/214 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GYDLSASQFSPDGRVFQIDYASKAVEKSG-TVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTI 70
            |:|...:.|||:||::|::||.||:.:.| |.:.:||||..|:..::.:..||.:.:....:|.|
 Frog     8 GFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVVVTQRKVPDKLLDSNTVTHLFRI 72

  Fly    71 EKNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLS 135
            .::||..:.|:.||.......||.||||::.::...||:..||.|:|.....||..:.:||.|..
 Frog    73 TESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCC 137

  Fly   136 IILASWDEVEGPQLYKIEPSGSSFGYFACASGKAKQLAKTEME---KLKMDMRTDELVESAGEII 197
            :||...||..|||::|.:|:|...|:.|..:|..:..|.:.:|   |.|:|...::.:|:|...:
 Frog   138 MILIGVDEENGPQVFKCDPAGYYCGFKATTAGVKQTEATSFLEKKVKKKLDWTYEQTLETAISCL 202

  Fly   198 YKVHDELKDKDFRFEMGLV 216
            ..|. .:..|....|:|:|
 Frog   203 STVL-SIDFKPSELEVGVV 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 69/212 (33%)
PRE1 6..231 CDD:223711 70/214 (33%)
psma6NP_989113.1 proteasome_alpha_type_6 8..220 CDD:239723 69/212 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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