DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha7 and Psma8

DIOPT Version :10

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001102354.1 Gene:Psma8 / 364814 RGDID:1311659 Length:250 Species:Rattus norvegicus


Alignment Length:258 Identity:78/258 - (30%)
Similarity:129/258 - (50%) Gaps:39/258 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDLSASQFSPDGRVFQIDYASKAVEKSGTVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTIEK 72
            ||.:.:.|||||.:||::||.:||:|..|.:||||.:.|||.|||...:||.:.....:|..::.
  Rat     5 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDD 69

  Fly    73 NIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLSII 137
            ::.||.|||.||...|...||.|..:::...|..:.::::...:|.....||..:..||||:|.:
  Rat    70 HVCMAFAGLTADARVVISRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISAL 134

  Fly   138 LASWDEVEGPQLYKIEPSGSSFGYFACASGKAKQLAKTEMEKLKMDMRTD--------------- 187
            :..:|:...|:||:.:|||:...:.|.|.|::   |||..|.|:.:...|               
  Rat   135 IVGFDDDGIPRLYQTDPSGTYHAWKANAIGRS---AKTVREFLEKNYTEDAISNDNEAIKLAIKA 196

  Fly   188 --ELVESAGEIIYKVHDELKDKDFRFEMGLVGRVTGGLHLINPSEL----TEKARKAGDAANK 244
              |:|:|.|:.|              |:.::.| ...|.:.:..|:    ||..|:..:|..|
  Rat   197 LLEVVQSGGKNI--------------ELAIIRR-DQPLKMFSAKEIELEVTEIEREKDEAEKK 244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 70/224 (31%)
Psma8NP_001102354.1 proteasome_alpha_type_7 5..213 CDD:239724 70/224 (31%)

Return to query results.
Submit another query.