DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and Prosalpha6

DIOPT Version :10

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_523532.1 Gene:Prosalpha6 / 34359 FlyBaseID:FBgn0250843 Length:279 Species:Drosophila melanogaster


Alignment Length:262 Identity:70/262 - (26%)
Similarity:120/262 - (45%) Gaps:33/262 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDLSASQFSPDGRVFQIDYASKAVEKSGTVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTIEK 72
            ||...:.:||.||:.|::||.:||:.....:|::.||..||......||:|  .|...:|..|:.
  Fly     6 YDSDVTVWSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSEL--SDTQRKIIPIDD 68

  Fly    73 NIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLSII 137
            ::|:::|||.||...::...|.|..||:..::...|:..|...:...:...|.....||:|:.::
  Fly    69 HLGISIAGLTADARVLSRYLRSECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLL 133

  Fly   138 LASWDEVEGPQLYKIEPSGSSFGYFACASGKAKQLAKTEMEK-------------LKMDMR---- 185
            :|.:|| .||.:|::.||.:.|...|.:.|...|.|:|.:||             ::..:|    
  Fly   134 VAGYDE-RGPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRAILG 197

  Fly   186 ---TDELVESAGEIIYKVHDELKDKDFRFEMGLVGRVTGGLHLINPSELTEKARKAGDAANKDED 247
               |||..:.||:  |.:...:..||..|.  ::.......|:....|      ...|....|:|
  Fly   198 TLPTDEQGKDAGQ--YDITVAIVGKDQPFT--ILSNKDSAKHVAIAKE------NDNDTPRNDDD 252

  Fly   248 SD 249
            .|
  Fly   253 DD 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 64/227 (28%)
Prosalpha6NP_523532.1 proteasome_alpha_type_1 6..219 CDD:239718 61/217 (28%)

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