DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and psma4

DIOPT Version :10

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_999862.1 Gene:psma4 / 326687 ZFINID:ZDB-GENE-040426-1932 Length:261 Species:Danio rerio


Alignment Length:250 Identity:77/250 - (30%)
Similarity:130/250 - (52%) Gaps:14/250 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDLSASQFSPDGRVFQIDYASKAVEKSGTVIGIRGKDAVVLAVEKIITSKLY-EPDAGGRIFTIE 71
            ||...:.|||:||::|::||.:|:..:||.:||...|.|:||.|:....||. |.....:|:.:.
Zfish     5 YDSRTTIFSPEGRLYQVEYAMEAIGHAGTCLGILANDGVLLAAERRNIHKLLDEVFFSEKIYKLN 69

  Fly    72 KNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLSI 136
            :::..:|||:.:|.|.:.:..|..|..|..|:::.||.:.|...:.....|||.:...||||:|:
Zfish    70 EDMACSVAGITSDANVLTNELRLIAQRYLLQYQEPIPCEQLVTALCDIKQAYTQFGGKRPFGVSL 134

  Fly   137 ILASWDEVEGPQLYKIEPSGSSFGYFACASGKAKQLAKTEMEKLKMDMRTDELVESAG-----EI 196
            :...||:..|.|||:.:|||:..|:.|...|.....|   :..||.|.:..|:..||.     ::
Zfish   135 LYMGWDKHYGFQLYQSDPSGNYGGWKATCIGNNSAAA---VSMLKQDYKEGEMTLSAALALAVKV 196

  Fly   197 IYKVHDELKDKDFRFEMGLVGRVTG--GLHLINPSELTE--KARKAGDA-ANKDE 246
            :.|..|..|....:.|:..:.|..|  .:.::...|:.|  |..:|.:| |.||:
Zfish   197 LNKTMDVSKLSAEKVEIATLTRENGKTKIKVLKQKEVEELIKKHEAEEAKAEKDK 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 67/213 (31%)
psma4NP_999862.1 proteasome_alpha_type_4 3..216 CDD:239721 67/213 (31%)

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