DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and psmb8a

DIOPT Version :10

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_571467.3 Gene:psmb8a / 30666 ZFINID:ZDB-GENE-990415-141 Length:271 Species:Danio rerio


Alignment Length:204 Identity:43/204 - (21%)
Similarity:78/204 - (38%) Gaps:64/204 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 DGRVFQIDYASKAVEKSGTVIGIRGKDAVVLAVE------KIITSKLYEPDAGGRIFTIEKNIGM 76
            ||....:::.:       |.:..:.:..|::||:      |.|.||     ...::..|...:..
Zfish    58 DGVCIDLNHGT-------TTLAFKFRHGVIVAVDSRASAGKYIASK-----EANKVIEINPYLLG 110

  Fly    77 AVAGLVADGNFVADIARQEAANYRQQFEQAIPL----KHLCHRVAGYVHAYTLYSAVRPFGLSI- 136
            .::|..||..:...:..:|...|:.:.:|.|.:    |.|.:.:.||          |..|||: 
Zfish   111 TMSGSAADCQYWERLLAKECRLYKLRNKQRISVSAASKLLSNMMLGY----------RGMGLSMG 165

  Fly   137 -ILASWDEVEGPQLYKIEPS-------------GSSFGYFACASGKAKQLAKTEMEKLKMDMRTD 187
             ::..||: :||.||.::.:             |:|:.|....||                .|.|
Zfish   166 SMICGWDK-QGPGLYYVDDNGTRLSGRMFSTGCGNSYAYGVVDSG----------------YRED 213

  Fly   188 ELVESAGEI 196
            ..||.|.|:
Zfish   214 MTVEEAYEL 222

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 43/204 (21%)
psmb8aNP_571467.3 proteasome_beta_type_5 68..255 CDD:239730 41/194 (21%)

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