DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and Psma2

DIOPT Version :10

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_058975.1 Gene:Psma2 / 29669 RGDID:61842 Length:234 Species:Rattus norvegicus


Alignment Length:228 Identity:73/228 - (32%)
Similarity:119/228 - (52%) Gaps:5/228 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GYDLSASQFSPDGRVFQIDYASKAVEKSGTVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTIE 71
            ||..|.:.|||.|::.||:||..||......:||:..:.||||.||...|.||:..:..::..|.
  Rat     5 GYSFSLTTFSPSGKLVQIEYALAAVAGGAPSVGIKAANGVVLATEKKQKSILYDERSVHKVEPIT 69

  Fly    72 KNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLSI 136
            |:||:..:|:..|...:...||:.|..|...:::.||...|..|||..:..||....|||||:|:
  Rat    70 KHIGLVYSGMGPDYRVLVHRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSL 134

  Fly   137 ILASWDEVEGPQLYKIEPSGSSFGYFACASGKAKQLAKTEMEK-LKMDMRTDELVESAGEIIYKV 200
            ::..|:|.. |.|::.:|||:.|.:.|.|.||.....||.:|| ...|:..::.:.:| .:..|.
  Rat   135 LICGWNEGR-PYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLELEDAIHTA-ILTLKE 197

  Fly   201 HDELKDKDFRFEMGLVGRVTGGLHLINPSELTE 233
            ..|.:..:...|:|:...  .|...:.|:|:.:
  Rat   198 SFEGQMTEDNIEVGICNE--AGFRRLTPTEVRD 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 70/209 (33%)
Psma2NP_058975.1 proteasome_alpha_type_2 6..231 CDD:239719 72/227 (32%)

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