DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and pre6

DIOPT Version :10

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_595165.1 Gene:pre6 / 2540175 PomBaseID:SPBC106.16 Length:259 Species:Schizosaccharomyces pombe


Alignment Length:218 Identity:71/218 - (32%)
Similarity:116/218 - (53%) Gaps:14/218 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 TGYDLSASQFSPDGRVFQIDYASKAVEKSGTVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTI 70
            :|||.:.|.||||||:.|::|..:||.:..|.|.:||.:.:|:.||:....||.......:|..:
pombe     2 SGYDRALSVFSPDGRLLQVEYGQEAVRRGTTAIALRGNECIVIGVERKNVPKLQNVSNFQKIAMV 66

  Fly    71 EKNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLS 135
            :.::.:|.|||.||...:.|.||.||.|::......:.:::|...|||....||....|||||:|
pombe    67 DNHVCLAFAGLNADARILIDKARVEAQNHKLNLADPVSIEYLTRYVAGVQQKYTQSGGVRPFGVS 131

  Fly   136 IILASWDEVEG-PQLYKIEPSGSSFGYFACASGKAKQLAKTEMEK-LKMDMRTDELVE------- 191
            .::|.:|..:. |::|:.||:|....:.|.|.|:|.:.|:..:|| .|..:..||.:.       
pombe   132 TLIAGFDVGDNTPRVYQTEPAGIYNAWKATAIGRASKAAREYLEKNWKEGLSRDETIHLAVSSLL 196

  Fly   192 -----SAGEIIYKVHDELKDKDF 209
                 ::|.|...:.|..||.:|
pombe   197 EVVQTASGNIELAIMDPGKDVEF 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 71/218 (33%)
pre6NP_595165.1 proteasome_alpha_type_7 4..211 CDD:239724 66/206 (32%)

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