DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Prosalpha7 and pre10

DIOPT Version :10

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_588040.1 Gene:pre10 / 2539378 PomBaseID:SPCC1795.04C Length:253 Species:Schizosaccharomyces pombe


Alignment Length:250 Identity:107/250 - (42%)
Similarity:157/250 - (62%) Gaps:7/250 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSTIGTGYDLSASQFSPDGRVFQIDYASKAVEKSGTVIGIRGKDAVVLAVEKIITSKLYEPDAGG 65
            ||:|||||||... ||||||:||.:||.||||.:.|.|||:.:|.|:||:||::||||.:|....
pombe     1 MSSIGTGYDLGLF-FSPDGRLFQAEYAYKAVENASTCIGIKCEDGVILALEKVVTSKLLKPRVNN 64

  Fly    66 RIFTIEKNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVR 130
            ||.:::::||:|..|.:.||..:...||.||.::|..:...||...:..|:..||..:|.||:||
pombe    65 RIGSVDRHIGIATTGFIPDGQHIVKRARDEATSWRDNYGSPIPGTVIADRLGNYVQLFTCYSSVR 129

  Fly   131 PFGLSIILASWDEVEGPQLYKIEPSGSSFGYFACASGKAKQLAKTEMEKLKM-DMRTDELVESAG 194
            |||:...:|::|. |||.||.:||:|..:||...|:||.:|:|:.|:|||.. .::..:.|:.|.
pombe   130 PFGVMSFVATYDS-EGPHLYMVEPNGVYWGYNGAAAGKGRQVARNELEKLNFSSLKMKDAVKEAA 193

  Fly   195 EIIYKVHDELKDKDFRFEMGLVGRVTGGLHLINPSELTEK----ARKAGDAANKD 245
            .|:|..|||..:|:...||..||..|.|:|...|.||.::    ||:..|...:|
pombe   194 RILYATHDEENNKEHEIEMTWVGVETNGIHTPVPDELLQEAEAYARRIADGEEED 248

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 92/211 (44%)
pre10NP_588040.1 proteasome_alpha_type_3 5..215 CDD:239720 92/211 (44%)

Return to query results.
Submit another query.