DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and Psmb1

DIOPT Version :9

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_035315.1 Gene:Psmb1 / 19170 MGIID:104884 Length:240 Species:Mus musculus


Alignment Length:223 Identity:44/223 - (19%)
Similarity:82/223 - (36%) Gaps:49/223 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGTGYDLSAS----QFSPDGRVFQIDYASKAVEKSGTVIGIRGKDAVVLAVEKIITS--KLYEPD 62
            :|.|...||.    :|||        ||.    ..|||:.|.|:|..::|.:..::.  .::..|
Mouse    14 LGMGPHGSAGPVQLRFSP--------YAF----NGGTVLAIAGEDFSIVASDTRLSEGFSIHTRD 66

  Fly    63 AGGRIFTIEKNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYS 127
            : .:.:.:.....:..:|...|...:..|.......|:....:|:....:...::..:::...: 
Mouse    67 S-PKCYKLTDKTVIGCSGFHGDCLTLTKIIEARLKMYKHSNNKAMTTGAIAAMLSTILYSRRFF- 129

  Fly   128 AVRPFGLSIILASWDEVEGPQLYKIEPSGS----SFGYFACASGKA--------------KQLAK 174
               |:.:..|:...||.....:|..:|.||    ||.    |.|.|              |.:..
Mouse   130 ---PYYVYNIIGGLDEEGKGAVYSFDPVGSYQRDSFK----AGGSASAMLQPLLDNQVGFKNMQN 187

  Fly   175 TEMEKLKMD--MR--TDELVESAGEIIY 198
            .|...|.:|  ||  .|..:.:|...:|
Mouse   188 VEHVPLTLDRAMRLVKDVFISAAERDVY 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 44/222 (20%)
PRE1 6..231 CDD:223711 43/221 (19%)
Psmb1NP_035315.1 PRE1 18..240 CDD:223711 42/219 (19%)
proteasome_beta_type_1 29..240 CDD:239726 40/208 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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