DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and pas-2

DIOPT Version :9

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_505750.1 Gene:pas-2 / 179493 WormBaseID:WBGene00003923 Length:231 Species:Caenorhabditis elegans


Alignment Length:216 Identity:72/216 - (33%)
Similarity:109/216 - (50%) Gaps:19/216 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGTGYDLSASQFSPDGRVFQIDYASKAVEKSGTVIGIRGKDAVVLAVE---KIITSKLYEPDAGG 65
            :|..|..|.:.|||.|::.||:||..||:.....:|:|.||.||||.|   .::|      |...
 Worm     1 MGDHYGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATENVGSVLT------DDQP 59

  Fly    66 RIFTIEKNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVR 130
            ::..|.|:||...:|:..|...:...||:.|..|...:.:.:|...|...:|..:..||....||
 Worm    60 KVEQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGVR 124

  Fly   131 PFGLSIILASWDEVEG-PQLYKIEPSGSSFGYFACASGKAKQLAKTEMEKLKMDMRTDELVESAG 194
            |||.|:::|.||:..| |.|::.:|||:.|.:.|.|.||....|||.:||     |..|    |.
 Worm   125 PFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEK-----RFSE----AL 180

  Fly   195 EIIYKVHDELKDKDFRFEMGL 215
            |:...:|..|......|::|:
 Worm   181 ELDDGIHTALLTLRESFDVGM 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 72/215 (33%)
PRE1 6..231 CDD:223711 71/214 (33%)
pas-2NP_505750.1 proteasome_alpha_type_2 5..229 CDD:239719 71/212 (33%)
PRK03996 10..228 CDD:235192 69/207 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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