DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and pas-2

DIOPT Version :10

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_505750.1 Gene:pas-2 / 179493 WormBaseID:WBGene00003923 Length:231 Species:Caenorhabditis elegans


Alignment Length:216 Identity:72/216 - (33%)
Similarity:109/216 - (50%) Gaps:19/216 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGTGYDLSASQFSPDGRVFQIDYASKAVEKSGTVIGIRGKDAVVLAVE---KIITSKLYEPDAGG 65
            :|..|..|.:.|||.|::.||:||..||:.....:|:|.||.||||.|   .::|      |...
 Worm     1 MGDHYGFSLTTFSPSGKLMQIEYALNAVKNGQPSVGLRAKDGVVLATENVGSVLT------DDQP 59

  Fly    66 RIFTIEKNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVR 130
            ::..|.|:||...:|:..|...:...||:.|..|...:.:.:|...|...:|..:..||....||
 Worm    60 KVEQISKHIGCVYSGMGPDFRILVKKARKIAMEYEMMYGEEMPTIQLVTDIAAVMQEYTQSGGVR 124

  Fly   131 PFGLSIILASWDEVEG-PQLYKIEPSGSSFGYFACASGKAKQLAKTEMEKLKMDMRTDELVESAG 194
            |||.|:::|.||:..| |.|::.:|||:.|.:.|.|.||....|||.:||     |..|    |.
 Worm   125 PFGASLLIAGWDKNPGRPLLFQCDPSGAYFAWKATALGKNDVNAKTFLEK-----RFSE----AL 180

  Fly   195 EIIYKVHDELKDKDFRFEMGL 215
            |:...:|..|......|::|:
 Worm   181 ELDDGIHTALLTLRESFDVGM 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 72/215 (33%)
pas-2NP_505750.1 proteasome_alpha_type_2 5..229 CDD:239719 71/212 (33%)

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