DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and pas-6

DIOPT Version :9

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_504472.1 Gene:pas-6 / 178943 WormBaseID:WBGene00003927 Length:260 Species:Caenorhabditis elegans


Alignment Length:248 Identity:67/248 - (27%)
Similarity:126/248 - (50%) Gaps:40/248 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDLSASQFSPDGRVFQIDYASKAVEKSGTVIGIRGK-DAVVLAVEKI---ITS---KLYEPDAGG 65
            ||...:.:||.||:.|::||.:|:::....:||:.: .||::|:::.   ::|   |:||     
 Worm     6 YDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSHQKKVYE----- 65

  Fly    66 RIFTIEKNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVR 130
                |:.:.|:::|||::||..:|...:.|.:::|..::||:|:|.|...:...:.|.|.|...|
 Worm    66 ----IDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQYYGRR 126

  Fly   131 PFGLSIILASWDEVEGPQLYKIEPSGSSFGYFACASGKAKQLAKTEMEKLKMDMRTDELVESAGE 195
            |||:.|::|.:|: :|..:.:.:||.........:.|...|.|:|.:|:     ..|...:|..|
 Worm   127 PFGVGILIAGYDK-DGAHIIQTDPSAEVVSMHGTSIGARSQSARTYLER-----NVDNFEKSTPE 185

  Fly   196 IIYKVHDELKDKDF----------RFEMGLVGRVTGGLHLINPSELTEKARKA 238
            .:. ||..|..:|.          ...:|:||:       .:|..|.|.|:.|
 Worm   186 QLI-VHALLALRDTLPAEENLNAQNTSIGIVGK-------DSPFSLLEDAQVA 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 60/224 (27%)
PRE1 6..231 CDD:223711 63/239 (26%)
pas-6NP_504472.1 PRE1 4..237 CDD:223711 67/248 (27%)
proteasome_alpha_type_1 6..216 CDD:239718 60/225 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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