DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and pbs-3

DIOPT Version :10

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_494913.1 Gene:pbs-3 / 173858 WormBaseID:WBGene00003949 Length:204 Species:Caenorhabditis elegans


Alignment Length:477 Identity:91/477 - (19%)
Similarity:151/477 - (31%) Gaps:181/477 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   965 QAESPSYLTNPEYTYNNALTSTLTETRTAAEGTDNPIPLPPRDRNKTIPVNQKRHVRKYPLIIPA 1029
            :.|:..||....:.:::||.:...:|.          |.||....::.|||........||:|  
 Worm    35 EEEALCYLDGFHWDFDSALEACRNQTS----------PFPPSLTVESTPVNANSASLTTPLMI-- 87

  Fly  1030 AGLQRTLNKVTQVTPIDEKSDVFSITDTAEPTTAGNNIHDDHLR--NDPDECSNLDVLHKSIESI 1092
                                                    |.||  |.|||.|..:.:.:...::
 Worm    88 ----------------------------------------DPLRSWNPPDEQSRNESIARFCYAV 112

  Fly  1093 KLGEIDEALTDLP-SNATEQLAQQKGYSKEFLQNNFPS---VSANPL-------------PMVCG 1140
            ....::||...|. ||....||..     .||.....:   ..:|||             |:..|
 Worm   113 AGVSVEEARAYLERSNWNINLAVD-----SFLVERRATPLQKKSNPLRLDSKSRFLDYSKPLRIG 172

  Fly  1141 EQHSSTLSNKITTTTLPATIP---AASAILTRRRTASDASVLGASAQRRQPPPPPPPPAPLMLSS 1202
            ...|.::....|...:|..||   |:|.:.|               |..|......||....:..
 Worm   173 RSSSDSMEVDSTGEQIPEAIPPLMASSQVNT---------------QENQESTSVWPPMKTWVDR 222

  Fly  1203 IAPESE-SRDPTYENLDIFQTHNSFCIDTASLHCESILENDADSCPTPHGIGGSTAATDLVDGFE 1266
            |..|:: ||:..:..|:..:.:.|..::.    |.|      .:.|                   
 Worm   223 ICHETKVSREEAFYYLEGSKWNFSRAVEA----CRS------KTLP------------------- 258

  Fly  1267 ASIVFDSINSSEFHLTRQPIKPPSAENEQHDRTTQPTTEGELKKSMNFVSCEDLLEFAEKPKGRA 1331
              :|..|..|:|        .||::..       ||:    |.|:      |.:..|.|......
 Worm   259 --VVSASQESAE--------APPNSPE-------QPS----LLKN------EWISSFCEAASTAT 296

  Fly  1332 RGLESDEPSPAQCLLTLEFIDWDIHKAIKLCKLQTILESF---------NLSLQECSDALQMYDW 1387
            |         .:.:..|:..:||:|:||..     .:|.|         |:||:| :..|.:...
 Worm   297 R---------EEAIYCLKVCNWDVHRAIGF-----YMEDFSEHQTSVAVNMSLKE-NRKLPLSSI 346

  Fly  1388 DLHTTAL------KLKSGNSSR 1403
            :|.:.:.      .||.|::||
 Worm   347 ELPSQSQFEASLGYLKEGSTSR 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720
pbs-3NP_494913.1 proteasome_beta_type_3 6..200 CDD:239728 43/221 (19%)
Blue background indicates that the domain is not in the aligned region.

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