DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and pas-5

DIOPT Version :9

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_492765.1 Gene:pas-5 / 172942 WormBaseID:WBGene00003926 Length:248 Species:Caenorhabditis elegans


Alignment Length:238 Identity:74/238 - (31%)
Similarity:127/238 - (53%) Gaps:14/238 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDLSASQFSPDGRVFQIDYASKAVEKSGTVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTIEK 72
            ||...:.|||:||:||::||.:||:...|.|||:..:.|:||.||..||||...||..:|..:::
 Worm     8 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKISKVDQ 72

  Fly    73 NIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAY----TLYSAVRPFG 133
            :||:..|||:||...:.:.|:.||.|:...:.:.|.::.:...||.....:    ...|..||||
 Worm    73 HIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDDVKASMSRPFG 137

  Fly   134 LSIILASWDEVEGPQLYKIEPSGSSFGYFACASGKAKQLAKTEMEKLKMDMRT-DELVESAGEII 197
            ::::.|..|: ||.:|:.::|||:.....|.:.|.|...|:..:::...|..| .|.::.|..|:
 Worm   138 VAMLFAGVDQ-EGAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHDALTIKEGLKMALAIL 201

  Fly   198 YKVHDELKDKDFRFEMGLV-------GRVTGGLHLINPSELTE 233
            .:|.:| |......|:.::       ||..|....::..||.:
 Worm   202 KQVMEE-KLNSANVEVVVIKPTVDAKGRPIGEFTRVSNEELDQ 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 69/212 (33%)
PRE1 6..231 CDD:223711 72/234 (31%)
pas-5NP_492765.1 PRK03996 8..248 CDD:235192 74/238 (31%)
proteasome_alpha_type_5 8..219 CDD:239722 69/212 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0638
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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