DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and pas-5

DIOPT Version :10

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_492765.1 Gene:pas-5 / 172942 WormBaseID:WBGene00003926 Length:248 Species:Caenorhabditis elegans


Alignment Length:238 Identity:74/238 - (31%)
Similarity:127/238 - (53%) Gaps:14/238 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDLSASQFSPDGRVFQIDYASKAVEKSGTVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTIEK 72
            ||...:.|||:||:||::||.:||:...|.|||:..:.|:||.||..||||...||..:|..:::
 Worm     8 YDRGVNTFSPEGRLFQVEYAIEAVKLGSTSIGIKTSEGVLLAAEKRSTSKLMVNDAIEKISKVDQ 72

  Fly    73 NIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAY----TLYSAVRPFG 133
            :||:..|||:||...:.:.|:.||.|:...:.:.|.::.:...||.....:    ...|..||||
 Worm    73 HIGVTFAGLIADSRTLVERAQIEAQNFWFTYNRKIRVEDVTQSVANLALQFGDDDVKASMSRPFG 137

  Fly   134 LSIILASWDEVEGPQLYKIEPSGSSFGYFACASGKAKQLAKTEMEKLKMDMRT-DELVESAGEII 197
            ::::.|..|: ||.:|:.::|||:.....|.:.|.|...|:..:::...|..| .|.::.|..|:
 Worm   138 VAMLFAGVDQ-EGAKLFHLDPSGTFIDCKAKSIGAASDGAEQNLKEQYHDALTIKEGLKMALAIL 201

  Fly   198 YKVHDELKDKDFRFEMGLV-------GRVTGGLHLINPSELTE 233
            .:|.:| |......|:.::       ||..|....::..||.:
 Worm   202 KQVMEE-KLNSANVEVVVIKPTVDAKGRPIGEFTRVSNEELDQ 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 69/212 (33%)
pas-5NP_492765.1 proteasome_alpha_type_5 8..219 CDD:239722 69/212 (33%)

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