DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and psma6a

DIOPT Version :10

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_705941.2 Gene:psma6a / 171585 ZFINID:ZDB-GENE-020326-1 Length:246 Species:Danio rerio


Alignment Length:239 Identity:79/239 - (33%)
Similarity:129/239 - (53%) Gaps:12/239 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GYDLSASQFSPDGRVFQIDYASKAVEKSG-TVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTI 70
            |:|...:.|||:||::|::||.||:.:.| |.:.:||||..|:..::.:..||.:......:|.|
Zfish     8 GFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVVITQRKVPDKLLDSSTVTHLFRI 72

  Fly    71 EKNIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSAVRPFGLS 135
            .:|||..::|:.||.......||.||||::.::...||:..||.|:|.....||..:.:||.|..
Zfish    73 TENIGCVMSGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIADISQVYTQNAEMRPLGCC 137

  Fly   136 IILASWDEVEGPQLYKIEPSGSSFGYFACASGKAKQLAKTEME---KLKMDMRTDELVESAGEII 197
            :|:...||..|||:||.:|:|...|:.|.|:|..:..|.:.:|   |.|:|...|:.||:|...:
Zfish   138 MIVVGVDEELGPQVYKCDPAGYYCGFKATAAGVKQTEATSFLEKKIKKKLDWTFDQTVETAISCL 202

  Fly   198 YKVHDELKDKDFRFEMGLVGRVTGGLHLINPSE-------LTEK 234
            ..|. .:..|....|:|:|........:::.||       |||:
Zfish   203 STVL-AIDFKPSELEIGVVTTEEPKFRILSESEIDTHLMALTER 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 73/212 (34%)
psma6aNP_705941.2 proteasome_alpha_type_6 8..220 CDD:239723 73/212 (34%)

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