DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prosalpha7 and psma5

DIOPT Version :9

Sequence 1:NP_724834.1 Gene:Prosalpha7 / 36018 FlyBaseID:FBgn0023175 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001096282.1 Gene:psma5 / 100124849 XenbaseID:XB-GENE-982653 Length:241 Species:Xenopus tropicalis


Alignment Length:202 Identity:68/202 - (33%)
Similarity:117/202 - (57%) Gaps:7/202 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YDLSASQFSPDGRVFQIDYASKAVEKSGTVIGIRGKDAVVLAVEKIITSKLYEPDAGGRIFTIEK 72
            ||...:.|||:||:||::||.:|::...|.|||:..:.|.|||||.|||.|.||.:..:|..|:.
 Frog     8 YDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDA 72

  Fly    73 NIGMAVAGLVADGNFVADIARQEAANYRQQFEQAIPLKHLCHRVAGYVHAYTLYSA-----VRPF 132
            :||.|::||:||...:.|.||.|..|:...:.:.:.::.:...|:.....:....|     .|||
 Frog    73 HIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPF 137

  Fly   133 GLSIILASWDEVEGPQLYKIEPSGSSFGYFACASGKAKQLAKTEMEKL-KMDMRTDELVESAGEI 196
            |::::....|| :||||:.::|||:.....|.|.|.|.:.|::.:::: ...|...|.::|:..|
 Frog   138 GVALLFGGADE-KGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLTI 201

  Fly   197 IYKVHDE 203
            :.:|.:|
 Frog   202 LKQVMEE 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prosalpha7NP_724834.1 proteasome_alpha_type_3 5..216 CDD:239720 68/202 (34%)
PRE1 6..231 CDD:223711 68/202 (34%)
psma5NP_001096282.1 proteasome_alpha_type_5 8..220 CDD:239722 68/202 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1222564at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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