DRSC/TRiP Functional Genomics Resources

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Protein Alignment Orc6 and orc6

DIOPT Version :10

Sequence 1:NP_477319.1 Gene:Orc6 / 36017 FlyBaseID:FBgn0023180 Length:257 Species:Drosophila melanogaster
Sequence 2:NP_596222.1 Gene:orc6 / 2540438 PomBaseID:SPBC2A9.12 Length:264 Species:Schizosaccharomyces pombe


Alignment Length:265 Identity:56/265 - (21%)
Similarity:100/265 - (37%) Gaps:89/265 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 LEKTTELVR-------LLELRSTNVPLQINEYGKIVLCADLASCMIGIAFDKEQALKLSGLRKSQ 78
            |:.|.||.|       ..||.|.::.|:||                         |..:.:.|.:
pombe    42 LKATEELCRPYMAAHLACELLSNDLNLEIN-------------------------LLATPIPKKK 81

  Fly    79 YLNNKRMFEKLLD-LNK-LASVND-------ICVQLGLNEVARKAEELMTLFKGVAATEDMGTDT 134
            |......|:::|. |.| ||:.:|       :|.:||.:......::|:   |.| .|.||..: 
pombe    82 YYKLFTYFQEILSPLTKSLAAKDDLMETITYLCTKLGGSTAIPYVKQLV---KAV-VTNDMRIE- 141

  Fly   135 SHPQYATMAVFQACRLL--KKKVSKSKL-MPFSNLRPSQFQLLE-------QQWERMIAKHHKES 189
             |.:...:|.:    ||  .|...|.:| :..:..|.:|..|.:       |.|..::::..:..
pombe   142 -HKRGIIIAAY----LLVSAKAFGKDELHINHTERRKAQSVLQDTSSALQIQYWMHVLSESWQYK 201

  Fly   190 KVPSSTDMEGKLKENQNENIKGHEAKKAHKPP---------------PEDYEIWKARMLAKAQAK 239
            ::|.:             .|:|:|::|....|               .::|.||||.:..:.|..
pombe   202 EIPLN-------------GIEGYESQKQRIKPWSGIASMIQIDYEKRLQNYPIWKACIEERIQYY 253

  Fly   240 LKELE 244
            ..:||
pombe   254 KSQLE 258

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Orc6NP_477319.1 Orc6_mid 5..>94 CDD:389868 17/80 (21%)
Orc6_mid 97..185 CDD:211425 22/104 (21%)
ORC6_CTD 187..242 CDD:293922 12/69 (17%)
orc6NP_596222.1 Orc6_mid 10..229 CDD:389868 48/234 (21%)

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