DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vamp7 and Vamp7

DIOPT Version :10

Sequence 1:NP_610524.1 Gene:Vamp7 / 36015 FlyBaseID:FBgn0266186 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_445983.1 Gene:Vamp7 / 85491 RGDID:621558 Length:220 Species:Rattus norvegicus


Alignment Length:218 Identity:113/218 - (51%)
Similarity:165/218 - (75%) Gaps:0/218 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPILYSVISRGTTVLAKFAECVGNFAEVTEHIIGRIGVHNHKMTYTHGDYLIHYTCENKLVYMCI 65
            |.||::|::||||:|||.|.|.|||.||||.|:.:|...|:|:||:||:||.||.|::::||:||
  Rat     1 MAILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVYLCI 65

  Fly    66 TDNEFERSRAFLFLADIKQKFIQTYGLQVATAIAYSMNTEFSKILAQQMVYFSQSREVDTISRVH 130
            ||::|||||||.||.::|::|..|||.:..||:.|:||:|||.:||.|:.:.|:::.:|.::...
  Rat    66 TDDDFERSRAFGFLNEVKKRFQTTYGSRAQTALPYAMNSEFSSVLAAQLKHHSENQSLDRVTETQ 130

  Fly   131 GQIDELKDIMVKNIDSLRDRGEKLELLVNKTENLSNNSVAFRKASRNLARQMFWKNIRVYVVVGL 195
            .|:||||.|||:|||.:..|||:||||::|||||.::||.|:..||||||.|..||:::..::.:
  Rat   131 AQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCVKNVKLTAIIVV 195

  Fly   196 VITFIVYVIVSMACGGLAWQSCV 218
            |....:|:|||..|||..|.|||
  Rat   196 VSIVFIYIIVSPLCGGFTWPSCV 218

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vamp7NP_610524.1 Longin 4..117 CDD:341428 62/112 (55%)
R-SNARE_VAMP7 124..188 CDD:277224 36/63 (57%)
Vamp7NP_445983.1 Longin 4..116 CDD:341428 62/111 (56%)
R-SNARE_VAMP7 124..188 CDD:277224 36/63 (57%)

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