DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vamp7 and VAMP714

DIOPT Version :9

Sequence 1:NP_001286255.1 Gene:Vamp7 / 36015 FlyBaseID:FBgn0266186 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_197628.1 Gene:VAMP714 / 832297 AraportID:AT5G22360 Length:221 Species:Arabidopsis thaliana


Alignment Length:219 Identity:79/219 - (36%)
Similarity:143/219 - (65%) Gaps:2/219 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPILYSVISRGTTVLAKFAECVGNFAEVTEHIIGRIG--VHNHKMTYTHGDYLIHYTCENKLVYM 63
            |.|:|:|::|||.|||:|:...||...|...|:.::.  :.:.::.::...|:.|....:.|.::
plant     1 MAIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSDGLTFL 65

  Fly    64 CITDNEFERSRAFLFLADIKQKFIQTYGLQVATAIAYSMNTEFSKILAQQMVYFSQSREVDTISR 128
            |:.::.|.|...|.:|.:|..:|::.||.....|.||:||.|||::|.|||.:||.:..|||::|
plant    66 CMANDTFGRRVPFSYLEEIHMRFMKNYGKVAHNAPAYAMNDEFSRVLHQQMEFFSSNPSVDTLNR 130

  Fly   129 VHGQIDELKDIMVKNIDSLRDRGEKLELLVNKTENLSNNSVAFRKASRNLARQMFWKNIRVYVVV 193
            |.|::.|::.:||:||:.:.:||:::||||:||..:.::|..|||.|:.|.|.::.||.::.|::
plant   131 VRGEVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFRKQSKRLRRALWMKNAKLLVLL 195

  Fly   194 GLVITFIVYVIVSMACGGLAWQSC 217
            ..:|.|::|:|::..|||:...||
plant   196 TCLIVFLLYIIIASFCGGITLPSC 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vamp7NP_001286255.1 Longin 32..97 CDD:290490 13/66 (20%)
Synaptobrevin 122..210 CDD:279324 33/87 (38%)
R-SNARE_VAMP7 124..188 CDD:277224 27/63 (43%)
VAMP714NP_197628.1 Longin 4..119 CDD:341428 37/114 (32%)
Synaptobrevin 124..212 CDD:395764 33/87 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 90 1.000 Domainoid score I2658
eggNOG 1 0.900 - - E1_COG5143
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H4121
Inparanoid 1 1.050 177 1.000 Inparanoid score I1475
OMA 1 1.010 - - QHG53513
OrthoDB 1 1.010 - - D1211929at2759
OrthoFinder 1 1.000 - - FOG0004661
OrthoInspector 1 1.000 - - otm3539
orthoMCL 1 0.900 - - OOG6_101193
Panther 1 1.100 - - O PTHR21136
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3273
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.840

Return to query results.
Submit another query.