DRSC/TRiP Functional Genomics Resources

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Protein Alignment Vamp7 and VAMP712

DIOPT Version :9

Sequence 1:NP_001286255.1 Gene:Vamp7 / 36015 FlyBaseID:FBgn0266186 Length:218 Species:Drosophila melanogaster
Sequence 2:NP_180106.1 Gene:VAMP712 / 817072 AraportID:AT2G25340 Length:219 Species:Arabidopsis thaliana


Alignment Length:219 Identity:85/219 - (38%)
Similarity:144/219 - (65%) Gaps:1/219 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPILYSVISRGTTVLAKFAECVGNFAEVTEHIIGRI-GVHNHKMTYTHGDYLIHYTCENKLVYMC 64
            |.|||::::|||.|||:.:....|.:.:.:.|:.:| |..:..::|:...|:.|....:.|..:|
plant     1 MSILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGLTVLC 65

  Fly    65 ITDNEFERSRAFLFLADIKQKFIQTYGLQVATAIAYSMNTEFSKILAQQMVYFSQSREVDTISRV 129
            :.|.:..|...|.||.||.|:|::|||..:.:|.||:||.|||::|.||:.|:|.....|||||:
plant    66 MADEDAGRRIPFSFLEDIHQRFVRTYGRAIHSAQAYAMNDEFSRVLNQQIEYYSNDPNADTISRI 130

  Fly   130 HGQIDELKDIMVKNIDSLRDRGEKLELLVNKTENLSNNSVAFRKASRNLARQMFWKNIRVYVVVG 194
            .|::::::|:|::|||::.||||:|||||:||.|:..|:..|||.:|.....::|:|.::.:::.
plant   131 KGEMNQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFRKQTRRFNNTVWWRNCKLTLLLI 195

  Fly   195 LVITFIVYVIVSMACGGLAWQSCV 218
            ||:..|:|:.|:.||.|....|||
plant   196 LVLLVIIYIGVAFACHGPTLPSCV 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vamp7NP_001286255.1 Longin 32..97 CDD:290490 20/65 (31%)
Synaptobrevin 122..210 CDD:279324 36/87 (41%)
R-SNARE_VAMP7 124..188 CDD:277224 30/63 (48%)
VAMP712NP_180106.1 Longin 4..118 CDD:341428 40/113 (35%)
Synaptobrevin 123..211 CDD:395764 36/87 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 90 1.000 Domainoid score I2658
eggNOG 1 0.900 - - E1_COG5143
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 177 1.000 Inparanoid score I1475
OMA 1 1.010 - - QHG53513
OrthoDB 1 1.010 - - D1211929at2759
OrthoFinder 1 1.000 - - FOG0004661
OrthoInspector 1 1.000 - - otm3539
orthoMCL 1 0.900 - - OOG6_101193
Panther 1 1.100 - - O PTHR21136
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X3273
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.840

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