DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Vamp7 and vamp3

DIOPT Version :10

Sequence 1:NP_610524.1 Gene:Vamp7 / 36015 FlyBaseID:FBgn0266186 Length:218 Species:Drosophila melanogaster
Sequence 2:XP_073771811.1 Gene:vamp3 / 415163 ZFINID:ZDB-GENE-040625-45 Length:112 Species:Danio rerio


Alignment Length:80 Identity:23/80 - (28%)
Similarity:48/80 - (60%) Gaps:0/80 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 ISRVHGQIDELKDIMVKNIDSLRDRGEKLELLVNKTENLSNNSVAFRKASRNLARQMFWKNIRVY 190
            :.:...|:||:.|||..|:|.:.:|.:||..|.::.:.|...:..|..::..|.|:.:|||::::
Zfish    28 LQQTQAQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKFWWKNVKMW 92

  Fly   191 VVVGLVITFIVYVIV 205
            .::..|:..|:.:||
Zfish    93 AILIAVVVIIIIIIV 107

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Vamp7NP_610524.1 Longin 4..117 CDD:341428
R-SNARE_VAMP7 124..188 CDD:277224 19/61 (31%)
vamp3XP_073771811.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.